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anamox1_curated_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_512_1
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..784)
DNA (783bp) protein (261aa)
IM pore protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SM58_METPP
nikB; IM pore protein
IM pore protein {ECO:0000313|EMBL:ABM96647.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_512_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

970..2811
DNA (1842bp) protein (614aa)
Putative binding protein component of ABC transporter Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPB2_9BURK
Putative binding protein component of ABC transporter {ECO:0000313|EMBL:EGJ10180.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ABC transporter substrate binding protein
anamox1_curated_scaffold_512_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2829..3257)
DNA (429bp) protein (143aa)
trxC; thioredoxin-2 TrxC (EC:1.8.1.8)
Thioredoxin Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPB5_9BURK
Thioredoxin {ECO:0000313|EMBL:EGJ10183.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_512_4
unknown

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3405..3701
DNA (297bp) protein (99aa)

This feature has no annotations

anamox1_curated_scaffold_512_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3747..4757)
DNA (1011bp) protein (337aa)
Ribosomal RNA large subunit methyltransferase N Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUM2_9BURK
Ribosomal RNA large subunit methyltransferase N {ECO:0000313|EMBL:EGJ12040.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
radical SAM domain-containing protein
anamox1_curated_scaffold_512_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4947..6176
DNA (1230bp) protein (410aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=Alicycliphilus denitrificans RepID=E8U0W3_ALIDB
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADU98714.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
anamox1_curated_scaffold_512_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6205..7740
DNA (1536bp) protein (512aa)
Major facilitator transporter Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPB6_9BURK
Major facilitator transporter {ECO:0000313|EMBL:EGJ10184.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ampG; putative transporter AmpG
anamox1_curated_scaffold_512_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7816..8742
DNA (927bp) protein (309aa)
Peptidase family M48 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WML0_9BURK
peptidase M48 family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8764..9429)
DNA (666bp) protein (222aa)
Transcriptional regulator, Crp/Fnr family Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XXN2_LEPCP
Crp/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACB36351.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_512_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9429..10070)
DNA (642bp) protein (214aa)
Zn-dependent hydrolase, glyoxylase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMK5_9BURK
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EHR73766.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
beta-lactamase domain-containing protein
anamox1_curated_scaffold_512_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10253..11716)
DNA (1464bp) protein (488aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI0003772662
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_12
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11836..13029)
DNA (1194bp) protein (398aa)
Sarcosine oxidase beta subunit (EC:1.5.3.1)
FAD dependent oxidoreductase Tax=Achromobacter xylosoxidans AXX-A RepID=F7T5U4_ALCXX
FAD dependent oxidoreductase {ECO:0000313|EMBL:EGP44311.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
anamox1_curated_scaffold_512_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13152..14120
DNA (969bp) protein (323aa)
TRAP transporter solute receptor, TAXI family protein Tax=Oceanibaculum indicum P24 RepID=K2JWB2_9PROT
bcsP31; 31 kDa immunogenic protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_14
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14117..14593
DNA (477bp) protein (159aa)
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14678..16924
DNA (2247bp) protein (749aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2KMX0_9PROT
transporter
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16940..18250)
DNA (1311bp) protein (437aa)
Uncharacterized protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GK15_NITSI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18563..18904
DNA (342bp) protein (114aa)
Sigma-54 modulation protein YfiA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXV7_RUBGI
yfiA; sigma-54 modulation protein YfiA
Sigma-54 modulation protein YfiA {ECO:0000313|EMBL:BAL97844.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_512_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19124..19594
DNA (471bp) protein (157aa)
ptsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN (EC:2.7.1.69)
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:BAL97845.1}; EC=2.7.1.69 {ECO:0000313|EMBL:BAL97845.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
PTS IIA-like nitrogen-regulatory protein PtsN Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXV8_RUBGI
anamox1_curated_scaffold_512_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19611..20567
DNA (957bp) protein (319aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hprK; HPr kinase/phosphorylase HprK (EC:2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLK8_9BURK
anamox1_curated_scaffold_512_20
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20569..21003)
DNA (435bp) protein (145aa)
Ferric uptake regulation protein Fur Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXW0_RUBGI
fur; ferric uptake regulation protein Fur
Ferric uptake regulation protein Fur {ECO:0000313|EMBL:BAL97847.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_512_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21145..21699
DNA (555bp) protein (185aa)
Small protein A (TmRNA-binding)-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLL0_9BURK
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
SmpA/OmlA domain-containing protein
anamox1_curated_scaffold_512_22
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21714..22535
DNA (822bp) protein (274aa)
dapB; dihydrodipicolinate reductase DapB (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
4-hydroxy-tetrahydrodipicolinate reductase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXW2_RUBGI
anamox1_curated_scaffold_512_23
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22573..25230
DNA (2658bp) protein (886aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Leucine--tRNA ligase Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y417_RAMTT
leuS; Leucyl-tRNA synthetase
anamox1_curated_scaffold_512_24
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25217..25732
DNA (516bp) protein (172aa)
Rare lipoprotein B Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSD0_9BURK
lptE; putative LPS-assembly lipoprotein LptE
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25746..26846
DNA (1101bp) protein (367aa)
holA; DNA polymerase III delta subunit HolA (EC:2.7.7.7)
DNA polymerase III subunit delta Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLL6_9BURK
DNA polymerase III subunit delta {ECO:0000313|EMBL:EGJ09234.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_512_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27028..28749
DNA (1722bp) protein (574aa)
Uncharacterized signaling protein PA1727 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCS0_9BURK
diguanylate cyclase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28763..29251)
DNA (489bp) protein (163aa)
CinA domain-containing protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXW9_RUBGI
CinA domain-containing protein
CinA domain-containing protein {ECO:0000313|EMBL:BAL97856.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_512_28
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29251..29775)
DNA (525bp) protein (175aa)
Phosphatidylglycerophosphatase A-like protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSD4_9BURK
phosphatidylglycerophosphatase A
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29798..30748)
DNA (951bp) protein (317aa)
thiL; thiamine-monophosphate kinase ThiL (EC:2.7.4.16)
Thiamine-monophosphate kinase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXX1_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_512_30
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30876..33194
DNA (2319bp) protein (773aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase {ECO:0000313|EMBL:ACB36170.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ACB36170.1};; EC=2.3.1.8 {ECO:0000313|EMBL:ACB36170.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
malic enzyme (EC:1.1.1.40 2.3.1.8)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7M2_LEPCP
Displaying items 1-30 of 68 in total

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