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anamox1_curated_scaffold_1364

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1364_1
unknown

Not on your lists

comp(3..134)
DNA (132bp) protein (44aa)

This feature has no annotations

anamox1_curated_scaffold_1364_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(131..730)
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACI1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40208.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1264..2484
DNA (1221bp) protein (407aa)
metB; cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase {ECO:0000313|EMBL:BAH40209.1}; EC=2.5.1.48 {ECO:0000313|EMBL:BAH40209.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Cystathionine gamma-synthase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACI2_GEMAT
anamox1_curated_scaffold_1364_4
unknown

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comp(2669..2830)
DNA (162bp) protein (54aa)

This feature has no annotations

anamox1_curated_scaffold_1364_5
unknown

Not on your lists

comp(2960..3436)
DNA (477bp) protein (159aa)

This feature has no annotations

anamox1_curated_scaffold_1364_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3854..6307)
DNA (2454bp) protein (818aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACI6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40213.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_7
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6545..8497)
DNA (1953bp) protein (651aa)
recD; exodeoxyribonuclease V, alpha subunit (EC:3.1.11.5)
DNA helicase/exodeoxyribonuclease V, alpha subunit Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QYD2_CHRSD
Tax=BJP_IG2102_Syntrophobacterales_60_12
anamox1_curated_scaffold_1364_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8494..12198)
DNA (3705bp) protein (1235aa)
Exodeoxyribonuclease V beta subunit {ECO:0000313|EMBL:BAH40218.1}; EC=3.1.11.5 {ECO:0000313|EMBL:BAH40218.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
recB; exodeoxyribonuclease V beta subunit (EC:3.1.11.5)
Exodeoxyribonuclease V beta subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACJ1_GEMAT
anamox1_curated_scaffold_1364_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12195..15659)
DNA (3465bp) protein (1155aa)
recC; exodeoxyribonuclease V gamma subunit (EC:3.1.11.5)
Exodeoxyribonuclease V gamma subunit {ECO:0000313|EMBL:BAH40219.1}; EC=3.1.11.5 {ECO:0000313|EMBL:BAH40219.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Exodeoxyribonuclease V gamma subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACJ2_GEMAT
anamox1_curated_scaffold_1364_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15625..16302)
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACJ9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40226.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16303..18402
DNA (2100bp) protein (700aa)
Putative two-component hybrid sensor and regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACK7_GEMAT
putative two-component hybrid sensor and regulator
Putative two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAH40234.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18418..19206)
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40238.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19218..20816)
DNA (1599bp) protein (533aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40239.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_14
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20819..23908)
DNA (3090bp) protein (1030aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI0003703DA3
Membrane receptor RagA {ECO:0000313|EMBL:KIA92774.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
TonB-dependent outer membrane protein, SusC/RagA
anamox1_curated_scaffold_1364_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24170..24607
DNA (438bp) protein (146aa)
rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase (EC:5.1.3.20)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ADP-L-glycero-D-manno-heptose-6-epimerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL5_GEMAT
anamox1_curated_scaffold_1364_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24594..25199
DNA (606bp) protein (202aa)
rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase (EC:5.1.3.20)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ADP-L-glycero-D-manno-heptose-6-epimerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL5_GEMAT
anamox1_curated_scaffold_1364_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25205..26770
DNA (1566bp) protein (522aa)
Putative amino acid ABC transporter permease/substrate binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL6_GEMAT
putative amino acid ABC transporter permease/substrate binding protein
Putative amino acid ABC transporter permease/substrate binding protein {ECO:0000313|EMBL:BAH40243.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26758..27513
DNA (756bp) protein (252aa)
Putative amino acid ABC transporter ATP-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL7_GEMAT
amino acid ABC transporter ATP-binding protein
Putative amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH40244.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27550..28983)
DNA (1434bp) protein (478aa)
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Glycogen synthase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL8_GEMAT
anamox1_curated_scaffold_1364_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28999..30369
DNA (1371bp) protein (457aa)
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00624}; EC=2.7.7.27 {ECO:0000255|HAMAP-Rule:MF_00624};; ADP-glucose pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00624}; Short=ADPGlc PPase {ECO:0000255|HAMAP-Rule:MF_00624};; ADP-glucose synthase {ECO:0000255|HAMAP-Rule:MF_00624}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Glucose-1-phosphate adenylyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=GLGC_GEMAT
anamox1_curated_scaffold_1364_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30413..30805
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACM0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40247.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

31091..32545
DNA (1455bp) protein (485aa)
Putative oxidoreductase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACM6_GEMAT
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAH40253.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

32642..34198
DNA (1557bp) protein (519aa)
Putative aminopeptidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACM7_GEMAT
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:BAH40254.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

34212..37028
DNA (2817bp) protein (939aa)
Putative peptidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACM8_GEMAT
putative peptidase
Putative peptidase {ECO:0000313|EMBL:BAH40255.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_1364_25
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

37071..40304
DNA (3234bp) protein (1078aa)
Putative two-component hybrid sensor and regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACP4_GEMAT
Putative two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAH40271.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
putative two-component hybrid sensor and regulator
Displaying 25 items

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