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anamox1_curated_scaffold_4589

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4589_1
unknown

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2..136
DNA (135bp) protein (45aa)

This feature has no annotations

anamox1_curated_scaffold_4589_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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146..1180
DNA (1035bp) protein (345aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
D-alanine--D-alanine ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL0_GEMAT
anamox1_curated_scaffold_4589_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1184..2158
DNA (975bp) protein (325aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEK9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40936.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_4589_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2181..2573
DNA (393bp) protein (131aa)
queF; NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
NADPH-dependent 7-cyano-7-deazaguanine reductase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEK8_GEMAT
anamox1_curated_scaffold_4589_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2806..3396
DNA (591bp) protein (197aa)
AraC family transcriptional regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEK7_GEMAT
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:BAH40934.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_4589_6
unknown

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3535..3813
DNA (279bp) protein (93aa)

This feature has no annotations

anamox1_curated_scaffold_4589_7
unknown

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3910..4254
DNA (345bp) protein (115aa)

This feature has no annotations

anamox1_curated_scaffold_4589_trna_1
unknown

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4220..4292
DNA (73bp)
transferRNA Phe
anamox1_curated_scaffold_4589_8
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4595..4792)
DNA (198bp) protein (66aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI0001693B2C
Uncharacterized protein {ECO:0000313|EMBL:AJQ87349.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola.;"
hypothetical protein
anamox1_curated_scaffold_4589_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5152..6003)
DNA (852bp) protein (284aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI00035FA737
Uncharacterized protein {ECO:0000313|EMBL:GAD22634.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
anamox1_curated_scaffold_4589_10
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6000..6605)
DNA (606bp) protein (202aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI000372A930
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
anamox1_curated_scaffold_4589_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6849..7307)
DNA (459bp) protein (153aa)
Putative transcriptional regulator Tax=Azospirillum brasilense Sp245 RepID=G8AZW0_AZOBR
ytfH; putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CCD03469.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
anamox1_curated_scaffold_4589_12
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7394..7993
DNA (600bp) protein (200aa)
Oxidoreductase ytfG Tax=Ketogulonicigenium vulgare RepID=E3F234_KETVY
oxidoreductase ytfG
Uncharacterized oxidoreductase ytfG {ECO:0000313|EMBL:AEM42191.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
Displaying 13 items

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