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anamox1_curated_scaffold_3819

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3819_1
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..401)
DNA (399bp) protein (133aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ93_9GAMM
anamox1_curated_scaffold_3819_2
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(532..948)
DNA (417bp) protein (139aa)
ribonuclease Tax=Saccharomonospora saliphila RepID=UPI00036BF4C4
PIN domain-containing protein family protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
anamox1_curated_scaffold_3819_3
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(945..1229)
DNA (285bp) protein (95aa)
Putative uncharacterized protein Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IYU0_9PSEU
antitoxin
Tax=BJP_08E140C01_Xanthomonadales_64_42
anamox1_curated_scaffold_3819_4
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1357..3021)
DNA (1665bp) protein (555aa)
Uncharacterized ABC transporter ATP-binding protein YjjK Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FLB3_XANCI
ATP-binding cassette protein, ChvD family
Uncharacterized ABC transporter ATP-binding protein YjjK {ECO:0000313|EMBL:CCG39150.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
anamox1_curated_scaffold_3819_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3205..4473
DNA (1269bp) protein (423aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
glycine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase Tax=Dyella ginsengisoli RepID=UPI00034898BC
anamox1_curated_scaffold_3819_6
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4581..5096
DNA (516bp) protein (172aa)
Transcriptional repressor NrdR Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UW95_PSEUP
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
nrdR; transcriptional regulator NrdR
anamox1_curated_scaffold_3819_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5093..5548
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J055_9SPHN
Signal peptide protein {ECO:0000313|EMBL:KGQ20861.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
signal peptide
anamox1_curated_scaffold_3819_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5545..6636
DNA (1092bp) protein (364aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
diaminohydroxyphosphoribosylaminopyrimidine deaminase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EEE164
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
anamox1_curated_scaffold_3819_9
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6636..7235
DNA (600bp) protein (200aa)
riboflavin synthase subunit alpha Tax=Xanthomonas sp. M97 RepID=UPI0003A01DB7
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KGM55173.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
riboflavin synthase alpha chain
anamox1_curated_scaffold_3819_10
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7417..8523
DNA (1107bp) protein (369aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase Tax=Xanthomonas sp. SHU308 RepID=UPI00036C5C8A
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
anamox1_curated_scaffold_3819_11
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8550..9032
DNA (483bp) protein (161aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037D21C5
6,7-dimethyl-8-ribityllumazine synthase
anamox1_curated_scaffold_3819_12
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9070..9525
DNA (456bp) protein (152aa)
N utilization substance protein B homolog Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWA1_PSEUP
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
nusB; transcription antitermination protein NusB
Displaying 12 items

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