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anamox1_curated_scaffold_1987

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1987_1
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..915)
DNA (915bp) protein (305aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
Tetraacyldisaccharide 4'-kinase Tax=Xanthomonas RepID=G2LTX2_9XANT
lpxK; tetraacyldisaccharide 4'-kinase
anamox1_curated_scaffold_1987_2
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(912..2663)
DNA (1752bp) protein (584aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Lipid A ABC exporter Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWF9_PSEUP
lipid A ABC exporter
anamox1_curated_scaffold_1987_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2660..3145)
DNA (486bp) protein (162aa)
Biopolymer transport protein Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWG0_PSEUP
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:KGQ19289.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
biopolymer transport protein
anamox1_curated_scaffold_1987_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3108..3707)
DNA (600bp) protein (200aa)
Biopolymer transport protein Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWG1_PSEUP
Ferric siderophore transport system, biopolymer transport protein ExbB {ECO:0000313|EMBL:KGQ19288.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
biopolymer transport protein
anamox1_curated_scaffold_1987_5
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3768..6200)
DNA (2433bp) protein (811aa)
Putative competence-related dna-transformation transporter protein Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UGZ7_XANAP
competence-related DNA-transformation transporter
Putative competence-related dna-transformation transporter protein {ECO:0000313|EMBL:CBE70794.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
anamox1_curated_scaffold_1987_6
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6354..7109)
DNA (756bp) protein (252aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
Lipoprotein-releasing system ATP-binding protein Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SQS3_XANCT
ABC transporter ATP-binding protein
anamox1_curated_scaffold_1987_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7102..8346)
DNA (1245bp) protein (415aa)
ABC transporter-type lipoprotein-releasing protein Tax=Xanthomonas campestris RepID=B0RSH1_XANCB
Lipoprotein releasing system transmembrane protein LolC {ECO:0000313|EMBL:KGQ19285.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
lipoprotein releasing system transmembrane protein
anamox1_curated_scaffold_1987_8
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8369..8860)
DNA (492bp) protein (164aa)
membrane protein Tax=Xanthomonas sacchari RepID=UPI000262B15A
membrane protein
Membrane protein {ECO:0000313|EMBL:AJC48114.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
anamox1_curated_scaffold_1987_9
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8802..9005)
DNA (204bp) protein (68aa)
Putative uncharacterized protein Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WT01_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:KGM52038.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
anamox1_curated_scaffold_1987_10
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9211..9591)
DNA (381bp) protein (127aa)
CopG protein Tax=Stenotrophomonas maltophilia D457 RepID=I0KP95_STEMA
Copper amine oxidase {ECO:0000313|EMBL:KGM56805.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
copper amine oxidase N-terminal protein
anamox1_curated_scaffold_1987_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9876..10658)
DNA (783bp) protein (261aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit Tax=Rhodanobacter denitrificans RepID=I4WWG8_9GAMM
anamox1_curated_scaffold_1987_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10924..12711)
DNA (1788bp) protein (596aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
succinate dehydrogenase, flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPA7_9GAMM
anamox1_curated_scaffold_1987_13
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12718..13113)
DNA (396bp) protein (132aa)
Succinate dehydrogenase, hydrophobic membrane anchor Tax=mine drainage metagenome RepID=T0Y8P2_9ZZZZ
Succinate dehydrogenase {ECO:0000313|EMBL:KGM55886.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
succinate dehydrogenase, hydrophobic membrane anchor protein
anamox1_curated_scaffold_1987_14
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13113..13505)
DNA (393bp) protein (131aa)
succinate dehydrogenase Tax=Dyella ginsengisoli RepID=UPI0003449C5F
NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98422.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
succinate dehydrogenase, cytochrome b556 subunit
anamox1_curated_scaffold_1987_15
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13553..13711)
DNA (159bp) protein (53aa)
hypothetical protein Tax=Arenimonas oryziterrae RepID=UPI0003B3DF98
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBA16317.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
anamox1_curated_scaffold_1987_16
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13945..15561
DNA (1617bp) protein (539aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEX3_ACIET
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:ACM34243.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
anamox1_curated_scaffold_1987_17
unknown

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comp(15548..16366)
DNA (819bp) protein (273aa)

This feature has no annotations

anamox1_curated_scaffold_1987_18
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16637..17227
DNA (591bp) protein (197aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI0003654DA4
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
anamox1_curated_scaffold_1987_19
Commensalibacter intestini, Commensalibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17279..17590)
DNA (312bp) protein (104aa)
Addiction module antitoxin Tax=Commensalibacter intestini A911 RepID=G6F250_9PROT
RelE/StbE family addiction module toxin
Addiction module antitoxin {ECO:0000313|EMBL:EHD13504.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae.;" source="Commensalibacter intestini A911.;"
anamox1_curated_scaffold_1987_20
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17598..17858)
DNA (261bp) protein (87aa)
Addiction module antitoxin, RelB/DinJ family Tax=Finegoldia magna ATCC 53516 RepID=D6S9U4_FINMA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
anamox1_curated_scaffold_1987_21
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17915..20188)
DNA (2274bp) protein (758aa)
MFS transporter Tax=Arenimonas oryziterrae RepID=UPI0003B5DE6B
MFS transporter {ECO:0000313|EMBL:KGM55882.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
transketolase domain-containing protein
anamox1_curated_scaffold_1987_22
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20411..21574)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase domain-containing protein Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTT8_PSEUU
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
anamox1_curated_scaffold_1987_23
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21787..22020
DNA (234bp) protein (78aa)
Putative uncharacterized protein Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C9N8_9XANT
Membrane protein {ECO:0000313|EMBL:EYR67381.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
anamox1_curated_scaffold_1987_24
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21968..22795
DNA (828bp) protein (276aa)
DNAase Tax=Xanthomonas sacchari RepID=UPI000263019D
DNAase
DNAase {ECO:0000313|EMBL:AJC45010.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
anamox1_curated_scaffold_1987_25
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22852..23940)
DNA (1089bp) protein (363aa)
Amidohydrolase 3 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV40_PSEUU
Amidohydrolase {ECO:0000313|EMBL:KGM51010.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
amidohydrolase
anamox1_curated_scaffold_1987_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24690..25799)
DNA (1110bp) protein (370aa)
ABC transporter Tax=Stenotrophomonas maltophilia RepID=UPI0002F9F0AC
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
anamox1_curated_scaffold_1987_27
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25796..26185)
DNA (390bp) protein (130aa)
ABC transporter Tax=Alcanivorax pacificus W11-5 RepID=K2GQB7_9GAMM
ABC transporter
ABC transporter {ECO:0000313|EMBL:AJD49855.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
Displaying 27 items

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