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anamox1_curated_scaffold_2468

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2468_1
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..134
DNA (132bp) protein (44aa)
Elongation factor G Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVH3_PSEUU
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
translation elongation factor G
anamox1_curated_scaffold_2468_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(643..945)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Firmicutes bacterium CAG:646 RepID=R5RJX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33242.1}; species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
anamox1_curated_scaffold_2468_3
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1736..2047
DNA (312bp) protein (104aa)
30S ribosomal protein S10 Tax=Xanthomonas campestris RepID=RS10_XANC8
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
anamox1_curated_scaffold_2468_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2059..2715
DNA (657bp) protein (219aa)
50S ribosomal protein L3 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVH0_PSEUU
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
50S ribosomal protein L3
anamox1_curated_scaffold_2468_5
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists


2718..3323
DNA (606bp) protein (202aa)
50S ribosomal protein L4 Tax=Xanthomonas RepID=UPI000361866C
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328, ECO:0000313|EMBL:KIJ72361.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
rplD; 50S ribosomal protein L4
anamox1_curated_scaffold_2468_6
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3320..3616
DNA (297bp) protein (99aa)
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
50S ribosomal protein L23 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
50S ribosomal protein L25
anamox1_curated_scaffold_2468_7
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3628..4455
DNA (828bp) protein (276aa)
50S ribosomal protein L2 Tax=Xanthomonas RepID=UPI000262A839
50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
anamox1_curated_scaffold_2468_8
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4462..4731
DNA (270bp) protein (90aa)
30S ribosomal protein S19 Tax=Xanthomonas RepID=UPI000262A83A
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
anamox1_curated_scaffold_2468_9
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists


4742..5077
DNA (336bp) protein (112aa)
50S ribosomal protein L22 Tax=Pseudoxanthomonas RepID=E6WVG5_PSEUU
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
50S ribosomal protein L22
anamox1_curated_scaffold_2468_10
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5080..5850
DNA (771bp) protein (257aa)
30S ribosomal protein S3 Tax=Xanthomonas RepID=UPI000262A83C
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
SSU ribosomal protein S3P
anamox1_curated_scaffold_2468_11
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5854..6267
DNA (414bp) protein (138aa)
50S ribosomal protein L16 Tax=Stenotrophomonas RepID=RL16_STRMK
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
rplP; 50S ribosomal protein L16
anamox1_curated_scaffold_2468_12
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6267..6473
DNA (207bp) protein (69aa)
50S ribosomal protein L29 Tax=Stenotrophomonas maltophilia RepID=UPI0003106FF7
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
rpmC; 50S ribosomal protein L29
anamox1_curated_scaffold_2468_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6470..6733
DNA (264bp) protein (88aa)
30S ribosomal protein S17 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVG1_PSEUU
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
30S ribosomal protein S17
anamox1_curated_scaffold_2468_14
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6749..7117
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URZ1_PSEUP
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
rplN; 50S ribosomal protein L14
anamox1_curated_scaffold_2468_15
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7135..7464
DNA (330bp) protein (110aa)
50S ribosomal protein L24 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVF9_PSEUU
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
50S ribosomal protein L24
anamox1_curated_scaffold_2468_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7466..8008
DNA (543bp) protein (181aa)
50S ribosomal protein L5 Tax=Stenotrophomonas maltophilia RepID=UPI00030362B5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
rplE; 50S ribosomal protein L5
anamox1_curated_scaffold_2468_17
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8125..8430
DNA (306bp) protein (102aa)
30S ribosomal protein S14 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URY8_PSEUP
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
rpsN; 30S ribosomal protein S14
anamox1_curated_scaffold_2468_18
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8584..8979
DNA (396bp) protein (132aa)
30S ribosomal protein S8 Tax=Xanthomonas fragariae LMG 25863 RepID=R0E170_9XANT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
rpsH; 30S ribosomal protein S8
anamox1_curated_scaffold_2468_19
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8992..9519
DNA (528bp) protein (176aa)
50S ribosomal protein L6 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVF5_PSEUU
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
50S ribosomal protein L6
anamox1_curated_scaffold_2468_20
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9600..9953
DNA (354bp) protein (118aa)
50S ribosomal protein L18 Tax=Stenotrophomonas maltophilia RepID=UPI0002E258CA
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
50S ribosomal protein L18
anamox1_curated_scaffold_2468_21
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10114..10653
DNA (540bp) protein (180aa)
30S ribosomal protein S5 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030504DD
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
30S ribosomal protein S5
anamox1_curated_scaffold_2468_22
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10646..10834
DNA (189bp) protein (63aa)
50S ribosomal protein L30 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EC3ED0
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
50S ribosomal protein L30
anamox1_curated_scaffold_2468_23
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10839..11276
DNA (438bp) protein (146aa)
50S ribosomal protein L15 Tax=Stenotrophomonas RepID=B2FQK3_STRMK
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
rplO; 50S ribosomal protein L15
anamox1_curated_scaffold_2468_24
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11284..12636
DNA (1353bp) protein (451aa)
preprotein translocase subunit SecY Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000306E4B9
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
preprotein translocase subunit SecY
anamox1_curated_scaffold_2468_25
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13042..13398
DNA (357bp) protein (119aa)
30S ribosomal protein S13 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URY0_PSEUP
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
rpsM; 30S ribosomal protein S13
anamox1_curated_scaffold_2468_26
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13411..13806
DNA (396bp) protein (132aa)
30S ribosomal protein S11 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVE8_PSEUU
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
30S ribosomal protein S11
anamox1_curated_scaffold_2468_27
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13826..14452
DNA (627bp) protein (209aa)
30S ribosomal protein S4 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URX8_PSEUP
rpsD; 30S ribosomal protein S4
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Displaying 27 items

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