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anamox1_curated_scaffold_4555

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4555_1
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..949
DNA (948bp) protein (316aa)
hypothetical protein Tax=Kordiimonas gwangyangensis RepID=UPI00035CBBC3
Uncharacterized protein {ECO:0000313|EMBL:KCZ53381.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringensis.;"
TonB-dependent receptor
anamox1_curated_scaffold_4555_2
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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967..2499
DNA (1533bp) protein (511aa)
TAP domain protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NM62_ROSCS
TAP domain-containing protein
TAP domain protein {ECO:0000313|EMBL:ABU58617.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
anamox1_curated_scaffold_4555_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2468..4570)
DNA (2103bp) protein (701aa)
Pyrrolo-quinoline quinone Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8H0_SPHWW
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABQ68586.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
anamox1_curated_scaffold_4555_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4748..4984
DNA (237bp) protein (79aa)
Prevent-host-death family protein Tax=Thauera aminoaromatica S2 RepID=N6Z373_9RHOO
prevent-host-death family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
anamox1_curated_scaffold_4555_5
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4981..5382
DNA (402bp) protein (134aa)
PilT protein domain-containing protein Tax=Thauera sp. 27 RepID=N6X8K4_9RHOO
PilT protein domain-containing protein {ECO:0000313|EMBL:ENO75555.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
PilT protein domain-containing protein
anamox1_curated_scaffold_4555_trna_1
unknown

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comp(5437..5518)
DNA (82bp)
transferRNA Leu
anamox1_curated_scaffold_4555_6
Idiomarina sp. A28L, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5709..7622
DNA (1914bp) protein (638aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. A28L.;"
ribonuclease R (EC:3.1.13.1)
Ribonuclease R Tax=Idiomarina sp. A28L RepID=F7RVJ0_9GAMM
anamox1_curated_scaffold_4555_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7626..8456
DNA (831bp) protein (277aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri DSM 10701.;"
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z7Q3_PSEST
RNA methyltransferase
anamox1_curated_scaffold_4555_8
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8410..8805
DNA (396bp) protein (132aa)
30S ribosomal protein S6 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=RS6_THISH
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000255|HAMAP-Rule:MF_00360}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_4555_9
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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8829..9068
DNA (240bp) protein (80aa)
30S ribosomal protein S18 Tax=Hahella ganghwensis RepID=UPI00037CB5FA
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
anamox1_curated_scaffold_4555_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9077..9526
DNA (450bp) protein (150aa)
50S ribosomal protein L9 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z7P8_PSEST
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
anamox1_curated_scaffold_4555_11

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9568..10083
DNA (516bp) protein (172aa)
Replicative DNA helicase (Fragment) Tax=mine drainage metagenome RepID=T0YTS5_9ZZZZ
Replicative DNA helicase {ECO:0000313|EMBL:EQD38981.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA helicase
Displaying 12 items

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