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anamox1_curated_scaffold_3317

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3317_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(180..488)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M9M6_RHIL3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK11694.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
anamox1_curated_scaffold_3317_2
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(529..882)
DNA (354bp) protein (118aa)
hypothetical protein Tax=Mastigocladopsis repens RepID=UPI0002EF10E0
Tax=GWA2_Gallionellales_55_18_curated
anamox1_curated_scaffold_3317_3
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(947..1321)
DNA (375bp) protein (125aa)
PemK-like protein Tax=Magnetospirillum sp. SO-1 RepID=M2Z7Q0_9PROT
PemK-like protein {ECO:0000313|EMBL:EME70350.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
mazF; Transcriptional modulator of MazE/toxin, MazF
anamox1_curated_scaffold_3317_4
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1275..1493)
DNA (219bp) protein (73aa)
SpoVT / AbrB like domain protein Tax=Brevundimonas sp. BAL3 RepID=B4WB31_9CAUL
Transcriptional regulator {ECO:0000313|EMBL:KDP95910.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
abrB; transcriptional regulator
anamox1_curated_scaffold_3317_5
unknown

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1684..1941
DNA (258bp) protein (86aa)

This feature has no annotations

anamox1_curated_scaffold_3317_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2012..2416)
DNA (405bp) protein (135aa)
PilT domain-containing protein; K07062 bin=RBG_16_Aminicenantes_63_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PilT protein domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
anamox1_curated_scaffold_3317_7
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2417..2647)
DNA (231bp) protein (77aa)
SpoVT/AbrB protein Tax=uncultured bacterium RepID=K2BQ35_9BACT
Virulence-associated protein-related protein
Virulence-associated protein-related protein {ECO:0000313|EMBL:AHY46603.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
anamox1_curated_scaffold_3317_8
R_Gammaproteobacteria_43_28, Gammaproteobacteria, Proteobacteria, Bacteria

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2953..5076
DNA (2124bp) protein (708aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BJC4_9BACT
putative Sulfatase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_43_28_curated
anamox1_curated_scaffold_3317_9
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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5274..5759
DNA (486bp) protein (162aa)
Fimbrial protein pilin Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WDL1_9GAMM
Fimbrial protein pilin {ECO:0000313|EMBL:EKF74247.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
pilE3; type IV fimbrial biogenesis protein
anamox1_curated_scaffold_3317_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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5937..7679
DNA (1743bp) protein (581aa)
Type II secretion system protein E Tax=Nitrococcus mobilis Nb-231 RepID=A4BQG9_9GAMM
type IV-A pilus assembly ATPase PilB
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_3317_11
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7697..8935
DNA (1239bp) protein (413aa)
type II secretion system protein F Tax=Methylohalobius crimeensis RepID=UPI0003B6D603
Type IV pilin biogenesis protein PilC {ECO:0000313|EMBL:EIT72183.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
type IV pilin biogenesis protein PilC
anamox1_curated_scaffold_3317_12
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8932..9768
DNA (837bp) protein (279aa)
Leader peptidase (Prepilin peptidase) / N-methyltransferase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XGH1_METNJ
anamox1_curated_scaffold_3317_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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9800..10072
DNA (273bp) protein (91aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
anamox1_curated_scaffold_3317_14
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10168..10386
DNA (219bp) protein (73aa)
Uncharacterized protein family UPF0150 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DS88_THIND
Uncharacterized protein family UPF0150
Uncharacterized protein family UPF0150 {ECO:0000313|EMBL:AGA32459.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
anamox1_curated_scaffold_3317_15
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10422..11057
DNA (636bp) protein (212aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
Dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase Tax=Thauera phenylacetica B4P RepID=N6ZL56_9RHOO
anamox1_curated_scaffold_3317_16
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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11062..11577
DNA (516bp) protein (172aa)
Cell division protein ZapD Tax=Marichromatium purpuratum 984 RepID=F9TWX9_MARPU
hypothetical protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Displaying 16 items

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