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anamox1_curated_scaffold_5352

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_5352_1
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..857
DNA (855bp) protein (285aa)
hypothetical protein Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034C4817
NODE_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96862.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
anamox1_curated_scaffold_5352_2
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

942..2378
DNA (1437bp) protein (479aa)
hypothetical protein Tax=Hirschia maritima RepID=UPI00036CE4B6
Monoamine oxidase {ECO:0000313|EMBL:EZP75683.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
amine oxidase
anamox1_curated_scaffold_5352_3
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2485..2943
DNA (459bp) protein (153aa)
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI00034A69C6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER57300.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
anamox1_curated_scaffold_5352_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2972..4675
DNA (1704bp) protein (568aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037BF821
Aminoacylase {ECO:0000313|EMBL:AKC86257.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
N-acyl-D-amino-acid deacylase
anamox1_curated_scaffold_5352_5
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4743..5744
DNA (1002bp) protein (334aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Pseudomonas aeruginosa RepID=M9S0S2_PSEAI
ErfK/YbiS/YcfS/YnhG family protein
Tax=RBG_16_Gamma2_64_11_curated
anamox1_curated_scaffold_5352_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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5751..7160
DNA (1410bp) protein (470aa)
anion transporter Tax=Halomonas lutea RepID=UPI00035C1F68
Putative sodium-dependent transporter {ECO:0000313|EMBL:GAK46151.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
anion transporter
anamox1_curated_scaffold_5352_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7163..7690
DNA (528bp) protein (176aa)
Flavin reductase Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DDT6_PSEFL
Flavin reductase {ECO:0000313|EMBL:ERP41075.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens NCIMB 11764.;"
flavin reductase domain-containing protein
anamox1_curated_scaffold_5352_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7735..10899)
DNA (3165bp) protein (1055aa)
Spermidine synthase {ECO:0000313|EMBL:GAO55814.1}; EC=2.5.1.16 {ECO:0000313|EMBL:GAO55814.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Spermine/spermidine synthase-related protein bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
anamox1_curated_scaffold_5352_9
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10934..11740
DNA (807bp) protein (269aa)
Protein containing DUF62 (Fragment) Tax=mine drainage metagenome RepID=T0ZUX2_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
anamox1_curated_scaffold_5352_10
unknown

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11848..12075
DNA (228bp) protein (76aa)

This feature has no annotations

anamox1_curated_scaffold_5352_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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12084..14672
DNA (2589bp) protein (863aa)
aspartate kinase (EC:4.1.1.20 2.7.2.4)
Aspartate kinase {ECO:0000313|EMBL:AEN73059.1}; EC=2.7.2.4 {ECO:0000313|EMBL:AEN73059.1};; EC=4.1.1.20 {ECO:0000313|EMBL:AEN73059.1};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Aspartate kinase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIY4_RHOMR
anamox1_curated_scaffold_5352_12
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14661..15323)
DNA (663bp) protein (221aa)
hypothetical protein Tax=Woodsholea maritima RepID=UPI00037B06DC
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
phosphoribosyl-ATP diphosphatase
anamox1_curated_scaffold_5352_13

Not on your lists

comp(15320..16054)
DNA (735bp) protein (245aa)
Imidazole glycerol phosphate synthase subunit HisF (Fragment) Tax=mine drainage metagenome RepID=T0ZDY0_9ZZZZ
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000313|EMBL:EQD43213.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
imidazole glycerol phosphate synthase
anamox1_curated_scaffold_5352_14
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16069..16809)
DNA (741bp) protein (247aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QNR9_BRESC
anamox1_curated_scaffold_5352_15
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16800..17417)
DNA (618bp) protein (206aa)
hisH; imidazole glycerol phosphate synthase (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
anamox1_curated_scaffold_5352_16
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17414..18487)
DNA (1074bp) protein (358aa)
imidazoleglycerol-phosphate dehydratase (EC:3.1.3.15 4.2.1.19)
imidazoleglycerol-phosphate dehydratase Tax=Dyella ginsengisoli RepID=UPI0003474EE1
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
anamox1_curated_scaffold_5352_17
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18481..19542)
DNA (1062bp) protein (354aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
histidinol-phosphate aminotransferase Tax=Dyella ginsengisoli RepID=UPI000347EC31
histidinol-phosphate aminotransferase
anamox1_curated_scaffold_5352_18
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19539..20516)
DNA (978bp) protein (326aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23)
bifunctional histidinal dehydrogenase/ histidinol dehydrogenase Tax=Dyella ginsengisoli RepID=UPI00034620A2
Displaying 18 items

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