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anamox1_curated_scaffold_12358

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_12358_1

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comp(1..372)
DNA (372bp) protein (124aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase, F subunit (Fragment) Tax=mine drainage metagenome RepID=T1AWG7_9ZZZZ
NADH-quinone oxidoreductase, F subunit {ECO:0000313|EMBL:EQD60698.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anamox1_curated_scaffold_12358_2

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comp(369..905)
DNA (537bp) protein (179aa)
NADH:ubiquinone oxidoreductase, 24 kDa subunit {ECO:0000313|EMBL:EQD69319.1}; EC=1.6.-.- {ECO:0000313|EMBL:EQD69319.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NADH:ubiquinone oxidoreductase, 24 kDa subunit Tax=mine drainage metagenome RepID=T1CLY7_9ZZZZ
NADH-quinone oxidoreductase subunit E
anamox1_curated_scaffold_12358_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(905..2158)
DNA (1254bp) protein (418aa)
NADH dehydrogenase I subunit D (EC:1.6.99.3)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
NADH-quinone oxidoreductase subunit D Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2P2_NITHN
anamox1_curated_scaffold_12358_4

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comp(2151..2813)
DNA (663bp) protein (221aa)
NADH dehydrogenase, subunit C {ECO:0000313|EMBL:EQD61174.1}; EC=1.6.-.- {ECO:0000313|EMBL:EQD61174.1};; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NADH (or F420H2) dehydrogenase, subunit C (EC:1.6.99.3)
NADH dehydrogenase subunit C Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000376715B
anamox1_curated_scaffold_12358_5
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2825..3340)
DNA (516bp) protein (172aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
NADH-quinone oxidoreductase subunit beta (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BTL2_9GAMM
anamox1_curated_scaffold_12358_6

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comp(3331..3729)
DNA (399bp) protein (133aa)
NADH dehydrogenase subunit A Tax=mine drainage metagenome RepID=T1BRA5_9ZZZZ
NADH dehydrogenase subunit A {ECO:0000313|EMBL:EQD72397.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
anamox1_curated_scaffold_12358_trna_1
unknown

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comp(3744..3825)
DNA (82bp)
transferRNA Leu
anamox1_curated_scaffold_12358_7
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3834..4160)
DNA (327bp) protein (109aa)
hypothetical protein Tax=Thiothrix disciformis RepID=UPI0003617749
Uncharacterized protein {ECO:0000313|EMBL:EIT70256.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
preprotein translocase subunit SecG
anamox1_curated_scaffold_12358_8
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4195..4929)
DNA (735bp) protein (245aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3N9_9GAMM
Displaying 9 items

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