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anamox1_curated_scaffold_9178

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_9178_1
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1495
DNA (1494bp) protein (498aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
dihydrolipoamide dehydrogenase Tax=Methylobacterium sp. WSM2598 RepID=UPI000373B297
dihydrolipoamide dehydrogenase
anamox1_curated_scaffold_9178_2
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1471..2133)
DNA (663bp) protein (221aa)
nth; endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on 5-formyluracil and 5-hydroxymethyluracil (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacterium R229.;"
endonuclease III Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E00624
anamox1_curated_scaffold_9178_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2130..2660)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI00037B5E52
ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox1_curated_scaffold_9178_4
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2657..4657)
DNA (2001bp) protein (667aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
metG; methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4U7_9GAMM
anamox1_curated_scaffold_9178_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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5526..6536
DNA (1011bp) protein (337aa)
Uncharacterized protein Tax=Variovorax paradoxus B4 RepID=T1XB34_VARPD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
anamox1_curated_scaffold_9178_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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6530..7330
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Variovorax paradoxus B4 RepID=T1XBJ4_VARPD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
anamox1_curated_scaffold_9178_7

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comp(7576..7947)
DNA (372bp) protein (124aa)
Twitching motility protein PilT Tax=mine drainage metagenome RepID=T1B359_9ZZZZ
Twitching motility protein PilT {ECO:0000313|EMBL:EQD47264.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
twitching motility protein
Displaying 7 items

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