ggKbase home page

anamox1_curated_scaffold_4714

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4714_1

Not on your lists

1..876
DNA (876bp) protein (292aa)
Acyl-coenzyme A dehydrogenase Tax=mine drainage metagenome RepID=T0ZX99_9ZZZZ
Acyl-coenzyme A dehydrogenase {ECO:0000313|EMBL:EQD49247.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
fadE; acyl-CoA dehydrogenase
anamox1_curated_scaffold_4714_2
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

873..1733
DNA (861bp) protein (287aa)
Putative uncharacterized protein Tax=gamma proteobacterium IMCC3088 RepID=F3L575_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGG28522.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
hypothetical protein
anamox1_curated_scaffold_4714_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1733..2905
DNA (1173bp) protein (391aa)
DNA polymerase IV Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IM85_ANADE
DNA polymerase IV {ECO:0000313|EMBL:AKF09123.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
DNA polymerase IV
anamox1_curated_scaffold_4714_4
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3003..3773
DNA (771bp) protein (257aa)
Oxidoreductase, short-chain dehydrogenase/reductase family Tax=Collimonas fungivorans (strain Ter331) RepID=G0AFY5_COLFT
Short-chain dehydrogenase {ECO:0000313|EMBL:KIF80540.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
Short-chain dehydrogenase/reductase SDR
anamox1_curated_scaffold_4714_5
unknown

Not on your lists

3857..4225
DNA (369bp) protein (123aa)

This feature has no annotations

anamox1_curated_scaffold_4714_6
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4269..4922
DNA (654bp) protein (218aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI00031D9693
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG62120.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
anamox1_curated_scaffold_4714_7
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4963..5703
DNA (741bp) protein (247aa)
Metal-binding integral membrane protein, putative Tax=Marinobacter lipolyticus SM19 RepID=R8AX15_9ALTE
Metal-binding integral membrane protein, putative {ECO:0000313|EMBL:EON90888.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolyticus SM19.;"
hypothetical protein
anamox1_curated_scaffold_4714_8
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5775..7193
DNA (1419bp) protein (473aa)
amidohydrolase Tax=Xanthomonas sacchari RepID=UPI00026304C2
amidohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
anamox1_curated_scaffold_4714_9
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7190..8449
DNA (1260bp) protein (420aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN48133.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
Imidazolonepropionase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
amidohydrolase
anamox1_curated_scaffold_4714_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8517..10943)
DNA (2427bp) protein (809aa)
TonB-dependent receptor Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDZ9_PHEZH
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACG78432.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
anamox1_curated_scaffold_4714_11
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11160..13250
DNA (2091bp) protein (697aa)
fadB; fused 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17 5.3.3.8 5.1.2.3)
3-hydroxyacyl-CoA dehydrogenase Tax=Herbaspirillum sp. JC206 RepID=UPI00030E6498
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KIF79891.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
anamox1_curated_scaffold_4714_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13265..14443
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADG30968.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ADG30968.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Acetyl-CoA acetyltransferase Tax=Thiomonas intermedia (strain K12) RepID=D5X1H2_THIK1
anamox1_curated_scaffold_4714_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

14500..16149
DNA (1650bp) protein (550aa)
Type II secretory pathway, component ExeA (Predicted ATPase) bin=GWC2_Nitrospirae-rel_56_14 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
exeA; General secretion pathway protein A
General secretion pathway protein A {ECO:0000313|EMBL:CBE67730.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
anamox1_curated_scaffold_4714_14
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16153..16872
DNA (720bp) protein (240aa)
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
anamox1_curated_scaffold_4714_15
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16903..17103)
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Roseobacter sp. CCS2 RepID=A4EEU5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA13417.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. CCS2.;"
hypothetical protein
anamox1_curated_scaffold_4714_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17100..17609)
DNA (510bp) protein (170aa)
GCN5 family N-acetyltransferase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000314B484
GCN5 family N-acetyltransferase
GCN5 family N-acetyltransferase {ECO:0000313|EMBL:AGP34310.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
anamox1_curated_scaffold_4714_17
unknown

Not on your lists

comp(17606..18556)
DNA (951bp) protein (317aa)

This feature has no annotations

anamox1_curated_scaffold_4714_18
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18711..20039
DNA (1329bp) protein (443aa)
Tax=GWF2_Sideroxydans_59_14_curated
Displaying 18 items

View Taxonomy