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anamox1_curated_scaffold_1014

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1014_1

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
Two-component system regulatory protein (Fragment) Tax=mine drainage metagenome RepID=T1BWS4_9ZZZZ
Two-component system regulatory protein {ECO:0000313|EMBL:EQD58330.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
anamox1_curated_scaffold_1014_2
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(405..716)
DNA (312bp) protein (104aa)
hypothetical protein Tax=Methylohalobius crimeensis RepID=UPI0003B65413
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK78001.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
anamox1_curated_scaffold_1014_3
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(765..1373)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI00036B9597
membrane protein
Tax=RBG_16_Gammaproteobacteria_57_12_curated
anamox1_curated_scaffold_1014_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1475..2272)
DNA (798bp) protein (266aa)
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI0003199833
MazG family protein
MazG family protein {ECO:0000313|EMBL:ABS64728.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
anamox1_curated_scaffold_1014_5
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2269..2937)
DNA (669bp) protein (223aa)
DNA mismatch repair protein MutT Tax=Cupriavidus sp. HPC(L) RepID=V2GRH6_9BURK
DNA mismatch repair protein MutT {ECO:0000313|EMBL:ESH92671.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
h16_A0898; NTP pyrophosphohydrolase (oxidative damage repair enzyme)
anamox1_curated_scaffold_1014_6
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2957..4357)
DNA (1401bp) protein (467aa)
fumarase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
fumarate hydratase Tax=Arhodomonas aquaeolei RepID=UPI00037322C0
anamox1_curated_scaffold_1014_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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4472..5836
DNA (1365bp) protein (455aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
adenylosuccinate lyase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F79673
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
anamox1_curated_scaffold_1014_8

Not on your lists

5902..6522
DNA (621bp) protein (207aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T0XWY7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD27326.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_1014_9
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6536..7018
DNA (483bp) protein (161aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000376C2AB
NUDIX hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
anamox1_curated_scaffold_1014_10
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7062..8201
DNA (1140bp) protein (380aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI0003768E6A
anamox1_curated_scaffold_1014_11

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8198..10663
DNA (2466bp) protein (822aa)
Aconitate hydratase {ECO:0000313|EMBL:EFK96461.1}; EC=4.2.1.3 {ECO:0000313|EMBL:EFK96461.1};; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Aconitate hydratase (Fragment) Tax=sediment metagenome RepID=D9PJ05_9ZZZZ
aconitate hydratase 1
anamox1_curated_scaffold_1014_12

Not on your lists

10936..11580
DNA (645bp) protein (215aa)
HAD family hydrolase Tax=mine drainage metagenome RepID=T1ATX6_9ZZZZ
HAD family hydrolase {ECO:0000313|EMBL:EQD60887.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
HAD family hydrolase
anamox1_curated_scaffold_1014_13

Not on your lists

comp(11609..12349)
DNA (741bp) protein (247aa)
Zinc protease (Fragment) Tax=mine drainage metagenome RepID=T1AES0_9ZZZZ
Zinc protease {ECO:0000313|EMBL:EQD40425.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
zinc protease
anamox1_curated_scaffold_1014_14
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12408..13214
DNA (807bp) protein (269aa)
Deoxyribonuclease Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USX6_PSEUP
NODE_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98207.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
deoxyribonuclease
anamox1_curated_scaffold_1014_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13211..14671
DNA (1461bp) protein (487aa)
Succinyl-diaminopimelate desuccinylase Tax=Sorangium cellulosum (strain So ce56) RepID=A9GLR9_SORC5
dapE1; succinyl-diaminopimelate desuccinylase
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CAN90313.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
anamox1_curated_scaffold_1014_16

Not on your lists

comp(14637..15251)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1A0F9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD34564.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
nuclease-like protein
anamox1_curated_scaffold_1014_17
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15248..16543)
DNA (1296bp) protein (432aa)
thrC; threonine synthase (EC:4.2.3.1)
threonine synthase Tax=Xanthomonas arboricola RepID=UPI000304EB3C
Threonine synthase {ECO:0000313|EMBL:AKC78038.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
anamox1_curated_scaffold_1014_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16540..17478)
DNA (939bp) protein (313aa)
thrB; homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
thrB; homoserine kinase
anamox1_curated_scaffold_1014_19
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17475..19958)
DNA (2484bp) protein (828aa)
aspartokinase Tax=Arenimonas oryziterrae RepID=UPI0003B58AFC
Uncharacterized protein {ECO:0000313|EMBL:KFN44573.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
aspartate kinase
anamox1_curated_scaffold_1014_20
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20148..21269
DNA (1122bp) protein (374aa)
Xanthine dehydrogenase {ECO:0000313|EMBL:EGW20948.1}; EC=1.17.1.4 {ECO:0000313|EMBL:EGW20948.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
Xanthine dehydrogenase Tax=Methylobacter tundripaludum SV96 RepID=G3J176_9GAMM
XshC-Cox1-family protein
anamox1_curated_scaffold_1014_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21317..22099
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Sphingopyxis sp. MC1 RepID=N9VX55_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGJ99176.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp. ND16A.;"
hypothetical protein
anamox1_curated_scaffold_1014_22
unknown

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22188..22379
DNA (192bp) protein (64aa)

This feature has no annotations

anamox1_curated_scaffold_1014_23
unknown

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22364..22573
DNA (210bp) protein (70aa)

This feature has no annotations

anamox1_curated_scaffold_1014_24
unknown

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22570..23139
DNA (570bp) protein (190aa)

This feature has no annotations

anamox1_curated_scaffold_1014_25
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23152..23766
DNA (615bp) protein (205aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase Tax=Methylomicrobium buryatense RepID=UPI000345ECF8
enzyme for molybdopterin cofactor synthesis
Tax=RBG_16_Gammaproteobacteria_51_14_curated
anamox1_curated_scaffold_1014_26
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23782..24468)
DNA (687bp) protein (229aa)
hypothetical protein Tax=Duganella zoogloeoides RepID=UPI00036C2D7C
tadG2a; flp pilus assembly protein TadG
Flp pilus assembly protein TadG {ECO:0000313|EMBL:CAJ92130.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
anamox1_curated_scaffold_1014_27
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24465..24962)
DNA (498bp) protein (166aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000370E482
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
anamox1_curated_scaffold_1014_28
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24959..25300)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Burkholderia sp. BT03 RepID=J2HT84_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EUC18372.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
hypothetical protein
anamox1_curated_scaffold_1014_29
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25303..26175)
DNA (873bp) protein (291aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037E18A4
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ACR01298.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
anamox1_curated_scaffold_1014_30
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26179..27021)
DNA (843bp) protein (281aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036B9EFD
Type II secretion system protein {ECO:0000313|EMBL:ENO83150.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
type II secretion system protein
Displaying items 1-30 of 42 in total

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