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anamox1_curated_scaffold_1150

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1150_1

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2..2029
DNA (2028bp) protein (676aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T0XVM8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD26841.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_1150_2
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2106..3068
DNA (963bp) protein (321aa)
Signal recognition particle receptor FtsY Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPD8_THISH
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_1150_3

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3190..3882
DNA (693bp) protein (231aa)
Cell division ATP-binding protein FtsE (Fragment) Tax=mine drainage metagenome RepID=T1AAE8_9ZZZZ
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EQD37889.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cell division ATP-binding protein FtsE
anamox1_curated_scaffold_1150_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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3882..4799
DNA (918bp) protein (306aa)
Cell division protein FtsX Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPE0_THISH
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
anamox1_curated_scaffold_1150_5
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4936..5817
DNA (882bp) protein (294aa)
RNA polymerase sigma 70 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003629A89
RNA polymerase sigma-32 subunit RpoH
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_1150_6
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6379..6924)
DNA (546bp) protein (182aa)
TPR repeat-containing protein Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1R0_9GAMM
TPR repeat-containing protein {ECO:0000313|EMBL:EHQ51747.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
hypothetical protein
anamox1_curated_scaffold_1150_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6921..9206)
DNA (2286bp) protein (762aa)
penicillin-binding protein 1B Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037E9DF2
penicillin-binding protein
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
anamox1_curated_scaffold_1150_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9321..9563)
DNA (243bp) protein (81aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002D94FB2
CopG family transcriptional regulator
CopG family transcriptional regulator {ECO:0000313|EMBL:AIF48875.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anamox1_curated_scaffold_1150_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9611..11617
DNA (2007bp) protein (669aa)
Hydrogenase 4 subunit B Tax=Rhodanobacter denitrificans RepID=I4WXB3_9GAMM
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:AGG89281.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1150_10
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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11617..12573
DNA (957bp) protein (319aa)
Putative NADH:ubiquinone oxidoreductase subunit 1 (Chain H) Tax=mine drainage metagenome RepID=E6PV76_9ZZZZ
Hydrogenase 3 component D {ECO:0000313|EMBL:EXI89454.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
formate hydrogenlyase
anamox1_curated_scaffold_1150_11
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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12580..13248
DNA (669bp) protein (223aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI000371C9F5
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
anamox1_curated_scaffold_1150_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13250..14707
DNA (1458bp) protein (486aa)
Hydrogenase 4 subunit F Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDN5_9GAMM
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
Hydrogenase 4 subunit F {ECO:0000313|EMBL:EIL97576.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
anamox1_curated_scaffold_1150_13
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14709..16262
DNA (1554bp) protein (518aa)
Formate hydrogenlyase Tax=Ralstonia pickettii DTP0602 RepID=U3QGF9_RALPI
formate hydrogenlyase
Formate hydrogenlyase {ECO:0000313|EMBL:AGW90055.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
anamox1_curated_scaffold_1150_14
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16262..16789
DNA (528bp) protein (176aa)
formate hydrogenlyase Tax=Azoarcus toluclasticus RepID=UPI0003731DC7
Formate hydrogenlyase {ECO:0000313|EMBL:KDP87371.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
NADH ubiquinone oxidoreductase, 20 kDa subunit
anamox1_curated_scaffold_1150_15
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17088..18770
DNA (1683bp) protein (561aa)
GMC oxidoreductase Tax=Burkholderia sp. JPY251 RepID=UPI000374678E
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EEA04052.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
glucose-methanol-choline oxidoreductase
anamox1_curated_scaffold_1150_16
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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18918..19232
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8S9_AROAE
Uncharacterized protein {ECO:0000313|EMBL:KHD04366.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
anamox1_curated_scaffold_1150_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19362..20792)
DNA (1431bp) protein (477aa)
RNA-splicing ligase RtcB Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RQ2_RHOFD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
anamox1_curated_scaffold_1150_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20886..21308)
DNA (423bp) protein (141aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00037A355F
metal dependent phosphohydrolase
Tax=RBG_16_Gamma2_65_34_curated
anamox1_curated_scaffold_1150_19
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

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comp(21473..22384)
DNA (912bp) protein (304aa)
Restriction endonuclease Tax=Candidatus Symbiobacter mobilis CR RepID=U5NCU0_9BURK
restriction endonuclease
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
anamox1_curated_scaffold_1150_20
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22621..22908)
DNA (288bp) protein (96aa)
Cold-shock protein, DNA-binding Tax=Aeromonas salmonicida subsp. salmonicida RepID=A4SJX6_AERS4
Uncharacterized protein {ECO:0000313|EMBL:GAJ48340.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. masoucida NBRC 13784.;"
cspC; cold-shock protein, DNA-binding
anamox1_curated_scaffold_1150_21
unknown

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22969..23130
DNA (162bp) protein (54aa)

This feature has no annotations

anamox1_curated_scaffold_1150_22

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23127..23321
DNA (195bp) protein (65aa)
Putative integron integrase (Fragment) Tax=uncultured microorganism RepID=C3U0K0_9ZZZZ
Putative integron integrase {ECO:0000313|EMBL:ACP39549.1}; Flags: Fragment;; species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
integrase
anamox1_curated_scaffold_1150_23
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(23378..23608)
DNA (231bp) protein (77aa)
Glutamate synthase (NADPH) small chain, (NADPH-GOGAT) {ECO:0000313|EMBL:CCH98496.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CCH98496.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9717.;"
Glutamate synthase (NADPH) small chain, (NADPH-GOGAT) Tax=Microcystis aeruginosa PCC 9807 RepID=I4HBJ9_MICAE
gltD; NADH-dependent glutamate synthase small subunit
anamox1_curated_scaffold_1150_24
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(23571..24830)
DNA (1260bp) protein (420aa)
glutamate synthase subunit beta Tax=Spirulina subsalsa RepID=UPI00030682E6
NADH/NADPH-dependent glutamate synthase small subunit
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
anamox1_curated_scaffold_1150_25
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(24802..27822)
DNA (3021bp) protein (1007aa)
glutamate synthase (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:ACB74182.1}; EC=1.4.7.1 {ECO:0000313|EMBL:ACB74182.1};; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Glutamate synthase (Ferredoxin) Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWQ5_OPITP
Displaying 25 items

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