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anamox1_curated_scaffold_1235

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1235_1
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1084
DNA (1083bp) protein (361aa)
Uncharacterized protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCN3_DESAR
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_58_19_curated
anamox1_curated_scaffold_1235_2
unknown

Not on your lists

1081..2013
DNA (933bp) protein (311aa)

This feature has no annotations

anamox1_curated_scaffold_1235_3
Stenotrophomonas sp. JSG1, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2022..2210)
DNA (189bp) protein (63aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B (Fragment) Tax=Stenotrophomonas sp. JSG1 RepID=H2E8U4_9GAMM
hypothetical protein
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:AEX92854.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. JSG1.;"
anamox1_curated_scaffold_1235_4
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2470..2871
DNA (402bp) protein (134aa)
Putative uncharacterized protein Tax=Hylemonella gracilis ATCC 19624 RepID=F3KX70_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGI75624.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
conserved membrane protein of unknown function
anamox1_curated_scaffold_1235_5
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2970..3662)
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N202_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE05803.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
anamox1_curated_scaffold_1235_6
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3756..4721)
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W3Q2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD32980.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
transketolase subunit B
anamox1_curated_scaffold_1235_7
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4723..5598)
DNA (876bp) protein (292aa)
Transketolase (EC:2.2.1.1)
UPI0003D79A65 related cluster Tax=unknown RepID=UPI0003D79A65
Uncharacterized protein {ECO:0000313|EMBL:EPD32981.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
anamox1_curated_scaffold_1235_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5798..6718)
DNA (921bp) protein (307aa)
Esterase/lipase/thioesterase Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4V5_NOVAD
Esterase/lipase/thioesterase {ECO:0000313|EMBL:KHS44083.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
esterase/lipase/thioesterase
anamox1_curated_scaffold_1235_9
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7091..7489
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I8T3F5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGO97935.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
anamox1_curated_scaffold_1235_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7486..8457
DNA (972bp) protein (324aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI000375E2A2
Uncharacterized protein {ECO:0000313|EMBL:KJS06036.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
anamox1_curated_scaffold_1235_11
unknown

Not on your lists

8597..9094
DNA (498bp) protein (166aa)

This feature has no annotations

anamox1_curated_scaffold_1235_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9248..10432)
DNA (1185bp) protein (395aa)
microsomal epoxide hydrolase (EC:3.3.2.9)
Putative epoxide hydrolase Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJF7_9SPHN
Putative epoxide hydrolase {ECO:0000313|EMBL:GAD48570.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
anamox1_curated_scaffold_1235_13
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10464..11756
DNA (1293bp) protein (431aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI0003767F14
diguanylate phosphodiesterase
Tax=RBG_16_Gallionellales_56_9_curated
anamox1_curated_scaffold_1235_14
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11794..12600)
DNA (807bp) protein (269aa)
PAP2 family protein bin=GWC2_Nitrospirae-rel_56_14 species=Pseudomonas denitrificans genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
anamox1_curated_scaffold_1235_15
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12759..13655
DNA (897bp) protein (299aa)
Luciferase family protein Tax=Frankia sp. (strain EAN1pec) RepID=A8L3M5_FRASN
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABW16285.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
anamox1_curated_scaffold_1235_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13627..13995)
DNA (369bp) protein (123aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI000365043D
hypothetical protein
Tax=CG_Rhodocyc_01
anamox1_curated_scaffold_1235_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14259..14609)
DNA (351bp) protein (117aa)
Putative transcriptional regulator, MerR family Tax=Azoarcus sp. KH32C RepID=H0Q1E1_9RHOO
putative transcriptional regulator, MerR family
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
anamox1_curated_scaffold_1235_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14630..14929
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Pseudomonas RepID=F8H239_PSEUT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EME01268.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri NF13.;"
anamox1_curated_scaffold_1235_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14932..15600
DNA (669bp) protein (223aa)
Transposase Tax=Azospirillum sp. (strain B510) RepID=D3P2P0_AZOS1
transposase
Transposase {ECO:0000313|EMBL:BAI75678.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
anamox1_curated_scaffold_1235_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15610..18240
DNA (2631bp) protein (877aa)
Uncharacterized protein Tax=Pseudomonas putida (strain GB-1) RepID=B0KGK8_PSEPG
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
anamox1_curated_scaffold_1235_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18244..21390
DNA (3147bp) protein (1049aa)
UvrD/REP helicase Tax=Pseudomonas putida (strain GB-1) RepID=B0KGK9_PSEPG
UvrD/REP helicase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
anamox1_curated_scaffold_1235_22
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21401..21991)
DNA (591bp) protein (197aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|SAAS:SAAS00064138};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 19593.;"
Trp repressor binding protein Tax=Thalassobacter arenae DSM 19593 RepID=S9QF34_9RHOB
flavodoxin/nitric oxide synthase
anamox1_curated_scaffold_1235_23
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22006..22422)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Thauera phenylacetica B4P RepID=N6YXK6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO96315.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
Displaying 23 items

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