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anamox1_curated_scaffold_1252

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1252_1
unknown

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2..166
DNA (165bp) protein (55aa)

This feature has no annotations

anamox1_curated_scaffold_1252_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

163..1542
DNA (1380bp) protein (460aa)
Uncharacterized protein Tax=Acinetobacter beijerinckii CIP 110307 RepID=N9FMV0_9GAMM
Putative membrane protein {ECO:0000313|EMBL:EXZ54490.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
anamox1_curated_scaffold_1252_3
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1539..2738
DNA (1200bp) protein (400aa)
Glycosyltransferase bin=GWF2_Bacteroidetes_35_48 species=Alishewanella jeotgali genus=Alishewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
group 1 glycosyl transferase
Tax=GWF2_Bacteroidetes_35_48_curated
anamox1_curated_scaffold_1252_4
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

2764..3072
DNA (309bp) protein (103aa)
Glycosyltransferase, group 1 family protein Tax=Leptospira interrogans str. FPW2026 RepID=J7VAL0_LEPIR
glycosyltransferase
Tax=RBG_16_Planctomycetes_43_13_curated
anamox1_curated_scaffold_1252_5
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3135..3911
DNA (777bp) protein (259aa)
Glycosyltransferase Tax=Salmonella choleraesuis RepID=U3GKU5_SALCE
glycosyltransferase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox1_curated_scaffold_1252_6
unknown

Not on your lists

3895..4656
DNA (762bp) protein (254aa)
hypothetical protein Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0B09
methylase
anamox1_curated_scaffold_1252_7
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4656..5690
DNA (1035bp) protein (345aa)
Similar to polysaccharide biosynthesis protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZP0_AROAE
wbjB; hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
anamox1_curated_scaffold_1252_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5697..6809
DNA (1113bp) protein (371aa)
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis Tax=Nitrobacter sp. Nb-311A RepID=A3WUD2_9BRAD
UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase {ECO:0000313|EMBL:ETR76353.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
capsular biosynthesis protein
anamox1_curated_scaffold_1252_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6806..7939
DNA (1134bp) protein (378aa)
Capsular polysaccharide synthesis enzyme Cap5G Tax=Rhizobium sp. RepID=L0NIE4_RHISP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ETR76352.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
UDP-N-acetylglucosamine 2-epimerase
anamox1_curated_scaffold_1252_10
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

7948..9195
DNA (1248bp) protein (416aa)
Glycosyl transferase group 1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIY9_ACCPU
group 1 glycosyl transferase
Tax=RBG_16_Chloroflexi_52_11_curated
anamox1_curated_scaffold_1252_11
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9539..9784
DNA (246bp) protein (82aa)
Acetyltransferase Tax=Thauera phenylacetica B4P RepID=N6ZW52_9RHOO
Acetyltransferase {ECO:0000313|EMBL:ENO98583.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
acetyltransferase
anamox1_curated_scaffold_1252_12

Not on your lists

comp(9806..10915)
DNA (1110bp) protein (370aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EQD30263.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EQD30263.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
UDP-N-acetylglucosamine 2-epimerase Tax=mine drainage metagenome RepID=T0YAV8_9ZZZZ
UDP-N-acetylglucosamine 2-epimerase
anamox1_curated_scaffold_1252_13
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11157..12281
DNA (1125bp) protein (375aa)
UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase Tax=Enterobacter sp. R4-368 RepID=R9VPG0_9ENTR
UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase
UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:AGN86582.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
anamox1_curated_scaffold_1252_14
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12313..12513)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
anamox1_curated_scaffold_1252_15
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12538..13731
DNA (1194bp) protein (398aa)
Putative uncharacterized protein bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
ATPase (AAA+ superfamily)-like protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
anamox1_curated_scaffold_1252_16
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14148..14681
DNA (534bp) protein (178aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
anamox1_curated_scaffold_1252_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14671..15300
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JVT2_BURVG
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
anamox1_curated_scaffold_1252_18
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15386..16720
DNA (1335bp) protein (445aa)
ugd; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:AAU91386.1}; EC=1.1.1.22 {ECO:0000313|EMBL:AAU91386.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
UDP-glucose 6-dehydrogenase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q604Q1_METCA
anamox1_curated_scaffold_1252_19
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16763..17023
DNA (261bp) protein (87aa)
CopG family transcriptional regulator Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THE0_MESCW
CopG family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
anamox1_curated_scaffold_1252_20
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17075..17395)
DNA (321bp) protein (107aa)
DNA gyrase-inactivating toxin CcdB Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WU79_PSEDE
hypothetical protein
DNA gyrase-inactivating toxin CcdB {ECO:0000313|EMBL:AGI23319.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
anamox1_curated_scaffold_1252_21
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17382..17684)
DNA (303bp) protein (101aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003762C30
CcdB antidote CcdA {ECO:0000313|EMBL:AGI23320.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
ccdA; CcdB antidote CcdA
anamox1_curated_scaffold_1252_22

Not on your lists

17749..17949
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T0YLZ1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD34093.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_1252_23
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17946..18350
DNA (405bp) protein (135aa)
Protein containing PilT protein Tax=mine drainage metagenome RepID=T0ZS27_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDI03841.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
PilT domain-containing protein
anamox1_curated_scaffold_1252_24
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18358..19803
DNA (1446bp) protein (482aa)
cpsB; mannose-1-phosphate guanyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:AJF07669.1}; EC=2.7.7.13 {ECO:0000313|EMBL:AJF07669.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
Mannose-1-phosphate guanylyltransferase-mannose-6-phosphate isomerase Tax=Xanthomonas translucens DAR61454 RepID=L7HC86_XANCT
anamox1_curated_scaffold_1252_25
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(19776..20501)
DNA (726bp) protein (242aa)
Putative 4'-phosphopantetheinyl transferase Tax=Candidatus Nitrospira defluvii RepID=D8PE17_9BACT
putative 4'-phosphopantetheinyl transferase
Putative 4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:CBK41476.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox1_curated_scaffold_1252_26
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20566..20943)
DNA (378bp) protein (126aa)
panD; aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
Aspartate 1-decarboxylase Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HHU5_ACHXA
anamox1_curated_scaffold_1252_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21044..21280
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
anamox1_curated_scaffold_1252_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21280..21687
DNA (408bp) protein (136aa)
Ribonuclease VapC Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LBZ9_THEPS
PilT-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
anamox1_curated_scaffold_1252_29
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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21745..23121
DNA (1377bp) protein (459aa)
Phosphomannomutase Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3N5_PELCD
manB-2; phosphomannomutase
Phosphomannomutase {ECO:0000313|EMBL:ABA89022.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
anamox1_curated_scaffold_1252_30
unknown

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comp(23199..24125)
DNA (927bp) protein (309aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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