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anamox1_curated_scaffold_1389

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1389_1
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1692)
DNA (1692bp) protein (564aa)
Uncharacterized protein Tax=Pseudomonas stutzeri KOS6 RepID=K6CH93_PSEST
Uncharacterized protein {ECO:0000313|EMBL:KHO65173.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;"
anamox1_curated_scaffold_1389_2
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1698..3173)
DNA (1476bp) protein (492aa)
Ribonuclease G {ECO:0000313|EMBL:EGV52107.1}; EC=3.1.26.- {ECO:0000313|EMBL:EGV52107.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
Fructosamine kinase Tax=sulfur-oxidizing symbionts RepID=G2DB84_9GAMM
ribonuclease G
anamox1_curated_scaffold_1389_3
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3170..3682)
DNA (513bp) protein (171aa)
Maf-like protein Thimo_2599 Tax=Thioflavicoccus mobilis 8321 RepID=L0GX27_9GAMM
MAF protein
Maf-like protein Thimo_2599 {ECO:0000256|HAMAP-Rule:MF_00528}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
anamox1_curated_scaffold_1389_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3774..4244)
DNA (471bp) protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribosomal RNA large subunit methyltransferase H Tax=Rhodanobacter denitrificans RepID=M4NED8_9GAMM
rRNA large subunit m3Psi methyltransferase RlmH
anamox1_curated_scaffold_1389_5
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4272..4715)
DNA (444bp) protein (148aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003648E7B
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
iojap-like ribosome-associated protein
anamox1_curated_scaffold_1389_6

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comp(4712..5386)
DNA (675bp) protein (225aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase Tax=uncultured bacterium RepID=K2CIN4_9BACT
anamox1_curated_scaffold_1389_7
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5383..6333)
DNA (951bp) protein (317aa)
DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ABI55756.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABI55756.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
DNA polymerase III, delta subunit Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ABN1_ALKEH
anamox1_curated_scaffold_1389_8
unknown

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6448..6663
DNA (216bp) protein (72aa)

This feature has no annotations

anamox1_curated_scaffold_1389_9

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comp(6735..7265)
DNA (531bp) protein (177aa)
Rare lipoprotein B Tax=mine drainage metagenome RepID=T1ATL7_9ZZZZ
Rare lipoprotein B {ECO:0000313|EMBL:EQD45360.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rlpB; lipoprotein B precursor
anamox1_curated_scaffold_1389_10
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7265..9937)
DNA (2673bp) protein (891aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=SYL_NITMU
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
anamox1_curated_scaffold_1389_11
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9961..11502)
DNA (1542bp) protein (514aa)
Peptidase Tax=Cupriavidus sp. HPC(L) RepID=V2KFA9_9BURK
Peptidase {ECO:0000313|EMBL:ESJ25143.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
peptidase
anamox1_curated_scaffold_1389_12
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11527..13068)
DNA (1542bp) protein (514aa)
Apolipoprotein N-acyltransferase Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K9M0_NITWC
apolipoprotein N-acyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
anamox1_curated_scaffold_1389_13
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13065..13949)
DNA (885bp) protein (295aa)
Putative Mg2+ and Co2+ transporter CorC Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YA03_THIV6
putative Mg2+ and Co2+ transporter CorC
Putative Mg2+ and Co2+ transporter CorC {ECO:0000313|EMBL:AFL73821.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
anamox1_curated_scaffold_1389_14
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13949..14437)
DNA (489bp) protein (163aa)
Endoribonuclease YbeY Tax=Thioflavicoccus mobilis 8321 RepID=L0GRZ2_9GAMM
metalloprotein
Tax=RBG_16_Gamma2_60_9_curated
anamox1_curated_scaffold_1389_15
Spiribacter sp. UAH-SP71, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14434..15447)
DNA (1014bp) protein (338aa)
Phosphate starvation protein PhoH Tax=Spiribacter sp. UAH-SP71 RepID=U5T0E2_9GAMM
phosphate starvation protein PhoH
Phosphate starvation protein PhoH {ECO:0000313|EMBL:AGY91004.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter sp. UAH-SP71.;"
anamox1_curated_scaffold_1389_16
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15456..16820)
DNA (1365bp) protein (455aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
(dimethylallyl)adenosine tRNA methylthiotransferase Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036DB753
(dimethylallyl)adenosine tRNA methylthiotransferase
anamox1_curated_scaffold_1389_17

Not on your lists

comp(16964..17470)
DNA (507bp) protein (169aa)
Single-strand DNA-binding protein (Fragment) Tax=mine drainage metagenome RepID=T1B945_9ZZZZ
Single-strand DNA-binding protein {ECO:0000313|EMBL:EQD50730.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
single-stranded DNA-binding protein
anamox1_curated_scaffold_1389_18
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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17538..20384
DNA (2847bp) protein (949aa)
excinuclease ABC subunit A Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035D360F
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
excinuclease ABC subunit A
anamox1_curated_scaffold_1389_19
unknown

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20430..20519
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 19 items

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