ggKbase home page

anamox1_curated_scaffold_1480

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1480_1
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..291
DNA (291bp) protein (97aa)
hypothetical protein Tax=Janthinobacterium sp. CG3 RepID=UPI0003461FC4
Ferrous iron transporter FeoA subunit {ECO:0000313|EMBL:EZP41300.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
feoA domain protein
anamox1_curated_scaffold_1480_2
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288..2171
DNA (1884bp) protein (628aa)
Transport protein B Tax=Hylemonella gracilis ATCC 19624 RepID=F3KTC5_9BURK
Transport protein B {ECO:0000313|EMBL:EGI77026.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
ferrous iron transport protein B
anamox1_curated_scaffold_1480_3
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2409..2933)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SP44_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERK90405.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
anamox1_curated_scaffold_1480_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3501..4952
DNA (1452bp) protein (484aa)
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582};; Imidodipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Xaa-Pro dipeptidase; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
pepQ; Xaa-Pro dipeptidase PepQ (EC:3.4.13.9)
hypothetical protein Tax=Marinobacterium rhizophilum RepID=UPI000378C145
anamox1_curated_scaffold_1480_5
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4846..5244)
DNA (399bp) protein (133aa)
Large-conductance mechanosensitive channel Tax=Desulfovibrio sp. X2 RepID=S7U2P2_9DELT
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
anamox1_curated_scaffold_1480_6

Not on your lists


comp(5369..5788)
DNA (420bp) protein (140aa)
Ribosomal protein L17 (Fragment) Tax=mine drainage metagenome RepID=T1CNS7_9ZZZZ
Ribosomal protein L17 {ECO:0000313|EMBL:EQD70144.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LSU ribosomal protein L17p
anamox1_curated_scaffold_1480_7

Not on your lists

comp(5802..6806)
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase alpha subunit {ECO:0000313|EMBL:EQD70143.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EQD70143.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA-directed RNA polymerase alpha subunit Tax=mine drainage metagenome RepID=T1BNH5_9ZZZZ
DNA-directed RNA polymerase subunit alpha
anamox1_curated_scaffold_1480_8
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6853..7476)
DNA (624bp) protein (208aa)
Ribosomal protein S4, bacterial-type Tax=mine drainage metagenome RepID=T1BK38_9ZZZZ
30S ribosomal protein S4
Tax=RBG_16_Gammaproteobacteria_66_13_curated
anamox1_curated_scaffold_1480_9

Not on your lists


comp(7497..7907)
DNA (411bp) protein (137aa)
Ribosomal protein S11, bacterial-type (Fragment) Tax=mine drainage metagenome RepID=T1BB69_9ZZZZ
Ribosomal protein S11, bacterial-type {ECO:0000313|EMBL:EQD70141.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S11
anamox1_curated_scaffold_1480_10
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7955..8335)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 Tax=uncultured bacterium RepID=K2DV85_9BACT
30S ribosomal protein S13
Tax=RBG_16_Gammaproteobacteria_66_13_curated
anamox1_curated_scaffold_1480_11
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8339..8455)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP87_SIDLE
ribosomal protein L36
Tax=RBG_16_Gammaproteobacteria_66_13_curated
anamox1_curated_scaffold_1480_12
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8475..9830)
DNA (1356bp) protein (452aa)
Protein translocase subunit SecY Tax=Thioalkalivibrio RepID=B8GV38_THISH
secY; preprotein translocase subunit SecY
Tax=RBG_16_Gammaproteobacteria_66_13_curated
anamox1_curated_scaffold_1480_13

Not on your lists


comp(9874..10308)
DNA (435bp) protein (145aa)
Ribosomal protein L15, bacterial-type Tax=mine drainage metagenome RepID=T0ZID8_9ZZZZ
Ribosomal protein L15, bacterial-type {ECO:0000313|EMBL:EQD29585.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rplO; large subunit ribosomal protein L15
anamox1_curated_scaffold_1480_14

Not on your lists


comp(10337..10525)
DNA (189bp) protein (63aa)
30S ribosomal protein S5 Tax=mine drainage metagenome RepID=T0ZLJ9_9ZZZZ
30S ribosomal protein S5 {ECO:0000313|EMBL:EQD29584.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpmD; 50S ribosomal protein L30
anamox1_curated_scaffold_1480_15

Not on your lists


comp(10529..11038)
DNA (510bp) protein (170aa)
Ribosomal protein S5, bacterial-type (Fragment) Tax=mine drainage metagenome RepID=T1AAR7_9ZZZZ
Ribosomal protein S5, bacterial-type {ECO:0000313|EMBL:EQD53893.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ribosomal protein S5, bacterial/organelle type
anamox1_curated_scaffold_1480_16
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11053..11412)
DNA (360bp) protein (120aa)
50S ribosomal protein L18 Tax=Nevskia ramosa RepID=UPI0003B5081F
rplR; 50S ribosomal protein L18
Tax=RBG_16_Gammaproteobacteria_66_13_curated
anamox1_curated_scaffold_1480_17

Not on your lists


comp(11427..11951)
DNA (525bp) protein (175aa)
Ribosomal protein L6, subgroup Tax=mine drainage metagenome RepID=T0ZPX8_9ZZZZ
Ribosomal protein L6, subgroup {ECO:0000313|EMBL:EQD30764.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L6
anamox1_curated_scaffold_1480_18
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11967..12362)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 Tax=Singularimonas variicoloris RepID=UPI0003687081
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
anamox1_curated_scaffold_1480_19

Not on your lists


comp(12377..12682)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 Tax=mine drainage metagenome RepID=T1AND6_9ZZZZ
30S ribosomal protein S14 {ECO:0000313|EMBL:EQD42214.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ribosomal S14p/S29e family protein
anamox1_curated_scaffold_1480_20

Not on your lists


comp(12698..13243)
DNA (546bp) protein (182aa)
50S ribosomal protein L5 Tax=mine drainage metagenome RepID=T0ZAW3_9ZZZZ
50S ribosomal protein L5 {ECO:0000313|EMBL:EQD42213.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LSU ribosomal protein L5p (L11e)
anamox1_curated_scaffold_1480_21

Not on your lists


comp(13264..13581)
DNA (318bp) protein (106aa)
Ribosomal protein L24 Tax=mine drainage metagenome RepID=T1B2T3_9ZZZZ
Ribosomal protein L24 {ECO:0000313|EMBL:EQD67171.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rplX; 50S ribosomal protein L24
anamox1_curated_scaffold_1480_22

Not on your lists


comp(13585..13953)
DNA (369bp) protein (123aa)
Ribosomal protein L14, bacterial-type Tax=mine drainage metagenome RepID=T1CIA8_9ZZZZ
Ribosomal protein L14, bacterial-type {ECO:0000313|EMBL:EQD67170.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L14
anamox1_curated_scaffold_1480_23
RLO_Gammaproteobacteria_52_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13979..14257)
DNA (279bp) protein (93aa)
30S ribosomal protein S17 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=RS17_HALHL
rpsQ; 30S ribosomal protein S17
Tax=RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated
anamox1_curated_scaffold_1480_24

Not on your lists


comp(14254..14457)
DNA (204bp) protein (68aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI0003814FD1
50S ribosomal protein L29 {ECO:0000313|EMBL:EQD63957.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_1480_25

Not on your lists


comp(14457..14870)
DNA (414bp) protein (138aa)
Ribosomal protein L16 Tax=mine drainage metagenome RepID=T0ZMK3_9ZZZZ
Ribosomal protein L16 {ECO:0000313|EMBL:EQD31015.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rplP; 50S ribosomal protein L16
anamox1_curated_scaffold_1480_26

Not on your lists


comp(14918..15652)
DNA (735bp) protein (245aa)
Ribosomal protein S3, bacterial (Fragment) Tax=mine drainage metagenome RepID=T1ANK7_9ZZZZ
Ribosomal protein S3, bacterial {ECO:0000313|EMBL:EQD43640.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S3
anamox1_curated_scaffold_1480_27

Not on your lists


comp(15656..15997)
DNA (342bp) protein (114aa)
Ribosomal protein L22, bacterial-type Tax=mine drainage metagenome RepID=T1DDR1_9ZZZZ
Ribosomal protein L22, bacterial-type {ECO:0000313|EMBL:EQD80160.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L22
anamox1_curated_scaffold_1480_28

Not on your lists


comp(16012..16293)
DNA (282bp) protein (94aa)
Ribosomal protein S19, bacterial-type Tax=mine drainage metagenome RepID=T1DFQ9_9ZZZZ
Ribosomal protein S19, bacterial-type {ECO:0000313|EMBL:EQD80159.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpsS; 30S ribosomal protein S19
anamox1_curated_scaffold_1480_29
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16299..17135)
DNA (837bp) protein (279aa)
50S ribosomal protein L2 Tax=Pseudomonas pelagia RepID=UPI0003AAAA54
rplB; 50S ribosomal protein L2
Tax=RBG_16_Gammaproteobacteria_66_13_curated
anamox1_curated_scaffold_1480_30

Not on your lists


comp(17159..17461)
DNA (303bp) protein (101aa)
50S ribosomal protein L23 Tax=mine drainage metagenome RepID=T1CCS9_9ZZZZ
50S ribosomal protein L23 {ECO:0000313|EMBL:EQD80157.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rplW; 50S ribosomal protein L23
Displaying items 1-30 of 34 in total

View Taxonomy