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anamox1_curated_scaffold_1559

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1559_1
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..3605
DNA (3603bp) protein (1201aa)
CheA signal transduction histidine kinase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1W4_9GAMM
CheA signal transduction histidine kinase {ECO:0000313|EMBL:EHQ51801.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
CheA signal transduction histidine kinases
anamox1_curated_scaffold_1559_2

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3616..4092
DNA (477bp) protein (159aa)
CheW domain-containing protein (Fragment) Tax=mine drainage metagenome RepID=T0YNU7_9ZZZZ
CheW domain-containing protein {ECO:0000313|EMBL:EQD37111.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
chemotaxis protein CheW
anamox1_curated_scaffold_1559_3
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4137..4868)
DNA (732bp) protein (244aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
16S rRNA methyltransferase
anamox1_curated_scaffold_1559_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4859..6220)
DNA (1362bp) protein (454aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=mine drainage metagenome RepID=T1C620_9ZZZZ
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
anamox1_curated_scaffold_1559_5
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6289..6891
DNA (603bp) protein (201aa)
N-acetylmuramoyl-L-alanine amidase family 2 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX80_NITHN
N-acetylmuramoyl-L-alanine amidase family 2
N-acetylmuramoyl-L-alanine amidase family 2 {ECO:0000313|EMBL:ADE15763.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
anamox1_curated_scaffold_1559_6

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comp(6877..7443)
DNA (567bp) protein (189aa)
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EQD46324.1}; EC=2.5.1.17 {ECO:0000313|EMBL:EQD46324.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ATP:cob(I)alamin adenosyltransferase Tax=mine drainage metagenome RepID=T1B094_9ZZZZ
ATP:cob(I)alamin adenosyltransferase
anamox1_curated_scaffold_1559_7

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7542..8303
DNA (762bp) protein (254aa)
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol-phosphate phosphatase Tax=mine drainage metagenome RepID=T1AW53_9ZZZZ
Inositol-phosphate phosphatase {ECO:0000313|EMBL:EQD46325.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anamox1_curated_scaffold_1559_8
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8319..9053)
DNA (735bp) protein (245aa)
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFD4_AZOSU
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:AEV24944.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
anamox1_curated_scaffold_1559_9
uncultured gamma proteobacterium HF4000_48J03, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9087..9773)
DNA (687bp) protein (229aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium HF4000_48J03.;"
pdxH; pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase Tax=uncultured gamma proteobacterium HF4000_48J03 RepID=E7C8V0_9GAMM
anamox1_curated_scaffold_1559_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9894..11003
DNA (1110bp) protein (370aa)
chorismate mutase (EC:1.3.1.12)
Chorismate mutase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRS3_HALO1 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
anamox1_curated_scaffold_1559_11
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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11000..12100
DNA (1101bp) protein (367aa)
Putative uncharacterized protein Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2D9D7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKH20874.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
diguanylate cyclase
anamox1_curated_scaffold_1559_12
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12149..13120)
DNA (972bp) protein (324aa)
ABC transporter permease Tax=Halomonas sp. PBN3 RepID=U7NI40_9GAMM
ABC transporter permease {ECO:0000313|EMBL:ERS82050.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.;"
transport system permease
anamox1_curated_scaffold_1559_13
uncultured gamma proteobacterium, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13216..13785
DNA (570bp) protein (190aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium.;"
RNA pyrophosphohydrolase Tax=uncultured gamma proteobacterium RepID=H5SC41_9GAMM
NUDIX hydrolase
anamox1_curated_scaffold_1559_14
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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13802..14527
DNA (726bp) protein (242aa)
hypothetical protein Tax=Hahella ganghwensis RepID=UPI00037C9194
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_1559_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14546..14950
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Thiothrix nivea DSM 5205 RepID=I3BX98_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ35991.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
anamox1_curated_scaffold_1559_16
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15003..15380
DNA (378bp) protein (126aa)
Iron-sulfur cluster insertion protein ErpA Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RVF2_ALLVD
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
anamox1_curated_scaffold_1559_17
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15382..16713)
DNA (1332bp) protein (444aa)
Peptidase M23 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLC9_THISH
peptidase M23
Tax=RBG_16_Gamma2_60_9_curated
anamox1_curated_scaffold_1559_18
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16846..18051
DNA (1206bp) protein (402aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
Tyrosine--tRNA ligase Tax=Spiribacter salinus M19-40 RepID=R4VMF6_9GAMM
anamox1_curated_scaffold_1559_16S_1
unknown

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18386..19658
DNA (1273bp)
16S ribosomal RNA (16S rRNA)
Displaying 19 items

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