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anamox1_curated_scaffold_1831

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1831_1
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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3..941
DNA (939bp) protein (313aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
Putative parvulin-type peptidyl-prolyl cis-trans isomerase Tax=Methyloglobulus morosus KoM1 RepID=V5C8Z1_9GAMM
PpiC-type peptidyl-prolyl cis-trans isomerase
anamox1_curated_scaffold_1831_2
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(938..2971)
DNA (2034bp) protein (678aa)
DNA ligase (NAD(+)) (EC:6.5.1.2)
NAD-dependent DNA ligase LigA Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035E390E
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
anamox1_curated_scaffold_1831_3
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2968..3750)
DNA (783bp) protein (261aa)
cell division protein ZipA Tax=Erwinia carotovora RepID=UPI0001A44988
Cell division protein ZipA homolog {ECO:0000256|HAMAP-Rule:MF_00509, ECO:0000256|SAAS:SAAS00054614}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. brasiliense.;"
cell division protein ZipA
anamox1_curated_scaffold_1831_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3769..7272)
DNA (3504bp) protein (1168aa)
chromosome segregation protein SMC Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003815DB4
chromosome segregation protein SMC
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_1831_5
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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7369..7758
DNA (390bp) protein (130aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BTT9_9GAMM
7-cyano-7-deazaguanine reductase
anamox1_curated_scaffold_1831_6

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7888..8697
DNA (810bp) protein (270aa)
RNA polymerase-binding, DksA (Fragment) Tax=mine drainage metagenome RepID=T0XTP9_9ZZZZ
RNA polymerase-binding, DksA {ECO:0000313|EMBL:EQD26166.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
dksA; DnaK transcriptional regulator DksA
anamox1_curated_scaffold_1831_7
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8657..9577
DNA (921bp) protein (307aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Glutamyl-Q tRNA(Asp) synthetase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJL7_AZOSU
glutamyl-queuosine tRNA(Asp) synthetase
anamox1_curated_scaffold_1831_8
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9583..11670)
DNA (2088bp) protein (696aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
Polyribonucleotide nucleotidyltransferase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3T6_9GAMM
polynucleotide phosphorylase/polyadenylase
anamox1_curated_scaffold_1831_9

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comp(11756..12025)
DNA (270bp) protein (90aa)
Ribosomal protein S15, bacterial-type Tax=mine drainage metagenome RepID=T0ZNX9_9ZZZZ
Ribosomal protein S15, bacterial-type {ECO:0000313|EMBL:EQD46187.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S15
anamox1_curated_scaffold_1831_10

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comp(12131..13018)
DNA (888bp) protein (296aa)
tRNA pseudouridine synthase B {ECO:0000313|EMBL:EQD57062.1}; EC=5.4.99.- {ECO:0000313|EMBL:EQD57062.1};; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
tRNA pseudouridine synthase B (Fragment) Tax=mine drainage metagenome RepID=T1AIG0_9ZZZZ
tRNA pseudouridine synthase B
anamox1_curated_scaffold_1831_11
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13028..13420)
DNA (393bp) protein (131aa)
ribosome-binding factor A Tax=Thioalkalivibrio RepID=UPI0003665367
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_1831_12
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13431..15971)
DNA (2541bp) protein (847aa)
Translation initiation factor IF-2 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=IF2_THISH
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_1831_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15997..16377)
DNA (381bp) protein (127aa)
peptidase M54 Tax=Pseudomonas stutzeri RepID=UPI0003140992
nusA; transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
Displaying 13 items

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