ggKbase home page

anamox1_curated_scaffold_4015

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4015_1

Not on your lists

85..612
DNA (528bp) protein (176aa)
Ribonucleotide reductase regulator NrdR-like protein Tax=mine drainage metagenome RepID=T1CBW7_9ZZZZ
Ribonucleotide reductase regulator NrdR-like protein {ECO:0000313|EMBL:EQD79762.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator
anamox1_curated_scaffold_4015_2
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

642..1715
DNA (1074bp) protein (358aa)
ribD; riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000369EA0E
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
anamox1_curated_scaffold_4015_3
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1718..2326
DNA (609bp) protein (203aa)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EGV17314.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EGV17314.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
riboflavin synthase subunit alpha Tax=Lamprocystis purpurea RepID=UPI000379D0C9
riboflavin synthase subunit alpha
anamox1_curated_scaffold_4015_4
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2323..3462
DNA (1140bp) protein (380aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase Tax=Singularimonas variicoloris RepID=UPI00035F1BBF
3,4-dihydroxy-2-butanone 4-phosphate synthase
anamox1_curated_scaffold_4015_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3500..3973
DNA (474bp) protein (158aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
6,7-dimethyl-8-ribityllumazine synthase Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7C7_9GAMM
ribH; 6,7-dimethyl-8-ribityllumazine synthase
anamox1_curated_scaffold_4015_6

Not on your lists

3970..4422
DNA (453bp) protein (151aa)
NusB antitermination factor Tax=mine drainage metagenome RepID=T1C1N0_9ZZZZ
NusB antitermination factor {ECO:0000313|EMBL:EQD59184.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NusB antitermination factor
anamox1_curated_scaffold_4015_7
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4441..5409
DNA (969bp) protein (323aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRU4_THISH
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_4015_8
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5501..6811
DNA (1311bp) protein (437aa)
Serine/threonine-protein kinase Tax=mine drainage metagenome RepID=T1A6R0_9ZZZZ
cyclic nucleotide-binding protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
anamox1_curated_scaffold_4015_9

Not on your lists

comp(6812..7630)
DNA (819bp) protein (273aa)
GTP cyclohydrolase (Fragment) Tax=mine drainage metagenome RepID=T1BAA9_9ZZZZ
GTP cyclohydrolase {ECO:0000313|EMBL:EQD69846.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GTP cyclohydrolase
anamox1_curated_scaffold_4015_10
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7696..8694)
DNA (999bp) protein (333aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
1-deoxy-D-xylulose-5-phosphate synthase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C076_NITHN
deoxyxylulose-5-phosphate synthase
Displaying 10 items

View Taxonomy