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anamox1_curated_scaffold_3797

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3797_1
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..147)
DNA (147bp) protein (49aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
phenylalanyl-tRNA synthetase Tax=Thioalkalivibrio sp. ALE20 RepID=UPI0003762629
anamox1_curated_scaffold_3797_2

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comp(154..516)
DNA (363bp) protein (121aa)
Ribosomal protein L20, bacterial-type Tax=mine drainage metagenome RepID=T0YU38_9ZZZZ
Ribosomal protein L20, bacterial-type {ECO:0000313|EMBL:EQD35407.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LSU ribosomal protein L20P
anamox1_curated_scaffold_3797_3
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(536..739)
DNA (204bp) protein (68aa)
50S ribosomal protein L35 Tax=uncultured bacterium RepID=K2AY26_9BACT
rpmI; 50S ribosomal protein L35
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_10_curated
anamox1_curated_scaffold_3797_4

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comp(888..1349)
DNA (462bp) protein (154aa)
Translation initiation factor IF-3 Tax=mine drainage metagenome RepID=T0ZNS3_9ZZZZ
Translation initiation factor IF-3 {ECO:0000313|EMBL:EQD46107.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
translation initiation factor IF-3
anamox1_curated_scaffold_3797_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1416..3344)
DNA (1929bp) protein (643aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=SYT_CUPTR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
anamox1_curated_scaffold_3797_6

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comp(3347..3727)
DNA (381bp) protein (127aa)
DnaK suppressor protein Tax=mine drainage metagenome RepID=T0YEH7_9ZZZZ
DnaK suppressor protein {ECO:0000313|EMBL:EQD30232.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
TraR/DksA family transcriptional regulator
anamox1_curated_scaffold_3797_7
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3796..4761
DNA (966bp) protein (322aa)
universal stress protein A Tax=Pseudomonas pelagia RepID=UPI00039BD356
Universal stress protein family
Uncharacterized protein {ECO:0000313|EMBL:AJE20667.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
anamox1_curated_scaffold_3797_trna_1
unknown

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comp(4781..4852)
DNA (72bp)
transferRNA Val
anamox1_curated_scaffold_3797_8
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4923..6968)
DNA (2046bp) protein (682aa)
excinuclease ABC subunit B Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003791B8A
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_3797_9
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7072..8277
DNA (1206bp) protein (402aa)
Aminotransferase class I and II Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C014_NITHN
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ADE16261.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
anamox1_curated_scaffold_3797_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8339..10606
DNA (2268bp) protein (756aa)
Putative arylsulfatase Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQB1_9SPHN
Putative arylsulfatase {ECO:0000313|EMBL:GAD51150.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
putative arylsulfatase
anamox1_curated_scaffold_3797_11
unknown

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10639..11505
DNA (867bp) protein (289aa)

This feature has no annotations

anamox1_curated_scaffold_3797_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11747..12559)
DNA (813bp) protein (271aa)
Phosphate ABC transporter, ATP-binding protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHJ4_AZOSU
phosphate ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
anamox1_curated_scaffold_3797_13
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12606..13571)
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Caulobacter crescentus OR37 RepID=R0D545_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83525.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
Displaying 14 items

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