ggKbase home page

anamox1_curated_scaffold_2005

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2005_1
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2859
DNA (2859bp) protein (953aa)
Putative excinuclease ABC subunit Tax=Achromobacter arsenitoxydans SY8 RepID=H0F1D2_9BURK
uvrA1; excinuclease ABC subunit A
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_2005_2
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2816..3610)
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=T0APT2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14864.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
short-chain dehydrogenase/reductase SDR
anamox1_curated_scaffold_2005_3
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3610..3864)
DNA (255bp) protein (85aa)
Putative uncharacterized protein Tax=Thiorhodococcus drewsii AZ1 RepID=G2DXT7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EXJ16760.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
hypothetical protein
anamox1_curated_scaffold_2005_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3872..4285)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Sphingomonas sp. MM-1 RepID=M4RZ21_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48796.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
anamox1_curated_scaffold_2005_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4499..5608
DNA (1110bp) protein (370aa)
alcohol dehydrogenase Tax=Leeia oryzae RepID=UPI0003797340
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
anamox1_curated_scaffold_2005_6

Not on your lists

5630..5932
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1BRM7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD71203.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_2005_7
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5940..7367)
DNA (1428bp) protein (476aa)
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_2005_8
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7684..8091)
DNA (408bp) protein (136aa)
Cell wall-associated hydrolase, invasion-associated protein Tax=Beggiatoa alba B18LD RepID=I3CJ90_9GAMM
Cell wall-associated hydrolase, invasion-associated protein {ECO:0000313|EMBL:EIJ43683.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
NLP/P60 protein
anamox1_curated_scaffold_2005_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8208..10481)
DNA (2274bp) protein (758aa)
Diguanylate cyclase/phosphodiesterase with GAF sensor Tax=Thiorhodococcus drewsii AZ1 RepID=G2E6B5_9GAMM
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
anamox1_curated_scaffold_2005_10
unknown

Not on your lists

10797..11039
DNA (243bp) protein (81aa)

This feature has no annotations

anamox1_curated_scaffold_2005_11
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11229..11924)
DNA (696bp) protein (232aa)
NAD-dependent epimerase/dehydratase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09AV0_STIAD
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADO72428.1}; Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:EAU68912.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
anamox1_curated_scaffold_2005_12
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

11959..13320
DNA (1362bp) protein (454aa)
hypothetical protein Tax=Microbulbifer variabilis RepID=UPI00036F9530
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
anamox1_curated_scaffold_2005_13
unknown

Not on your lists

comp(13289..14119)
DNA (831bp) protein (277aa)

This feature has no annotations

anamox1_curated_scaffold_2005_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14079..15128)
DNA (1050bp) protein (350aa)
hypothetical protein Tax=Microbulbifer variabilis RepID=UPI00035FC0B3
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
anamox1_curated_scaffold_2005_15
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15125..15268)
DNA (144bp) protein (48aa)
Secreted protein, containing von Willebrand factor (VWF) type A domain Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0N0_9GAMM
Secreted protein {ECO:0000313|EMBL:KGE04464.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
hypothetical protein
Displaying 15 items

View Taxonomy