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anamox1_curated_scaffold_2200

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2200_1
R_OP3X_51_18, OP3X, Bacteria

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1..642
DNA (642bp) protein (214aa)
ugd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
tuaD; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
anamox1_curated_scaffold_2200_2
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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852..1049
DNA (198bp) protein (66aa)
D-amino-acid transaminase (EC:2.6.1.21)
D-amino-acid transaminase {ECO:0000313|EMBL:ACL73781.1}; EC=2.6.1.21 {ECO:0000313|EMBL:ACL73781.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
D-amino-acid transaminase Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GMW6_THISH
anamox1_curated_scaffold_2200_3

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1043..1309
DNA (267bp) protein (89aa)
Protein containing DUF493 (Fragment) Tax=mine drainage metagenome RepID=T1ATB8_9ZZZZ
Protein containing DUF493 {ECO:0000313|EMBL:EQD43989.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_2200_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1395..1964
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A8C2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD51008.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
anamox1_curated_scaffold_2200_5
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1989..3269)
DNA (1281bp) protein (427aa)
PREDICTED: protein spinster homolog 1-like Tax=Pantholops hodgsonii RepID=UPI0003C12757
Major facilitator family transporter {ECO:0000313|EMBL:GAM96794.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
major facilitator superfamily transport protein
anamox1_curated_scaffold_2200_6

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comp(3266..4126)
DNA (861bp) protein (287aa)
Hydrolase alpha/beta fold family Tax=uncultured microorganism RepID=F8UH95_9ZZZZ
Hydrolase alpha/beta fold family {ECO:0000313|EMBL:AEI30402.1}; species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
alpha/beta hydrolase fold protein
anamox1_curated_scaffold_2200_7
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4123..4746)
DNA (624bp) protein (208aa)
lipoate-protein ligase B Tax=Pseudomonas caeni RepID=UPI0003B4E4BE
lipoate--protein ligase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_2200_8
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4743..5777)
DNA (1035bp) protein (345aa)
lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter salinus M19-40.;"
Lipoyl synthase Tax=Spiribacter salinus M19-40 RepID=R4VDJ7_9GAMM
anamox1_curated_scaffold_2200_9
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5788..6441)
DNA (654bp) protein (218aa)
Nucleotidyl transferase Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RP60_ALLVD
Nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ADC63450.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
anamox1_curated_scaffold_2200_10

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comp(6450..7559)
DNA (1110bp) protein (370aa)
Aminoglycoside phosphotransferase (Fragment) Tax=mine drainage metagenome RepID=T1CAB8_9ZZZZ
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EQD62514.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_2200_11
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7611..9863
DNA (2253bp) protein (751aa)
LPS-assembly protein LptD Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GMX4_THISH
organic solvent tolerance protein
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_2200_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9881..11188
DNA (1308bp) protein (436aa)
PpiC-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Chaperone SurA Tax=Nitrosococcus oceani RepID=SURA_NITOC
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_2200_13
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11210..12559
DNA (1350bp) protein (450aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
Tryptophan synthase beta chain Tax=sulfur-oxidizing symbionts RepID=G2DGW4_9GAMM
tryptophan synthase subunit beta
anamox1_curated_scaffold_2200_14
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12566..13561
DNA (996bp) protein (332aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase Tax=Burkholderia sp. Ch1-1 RepID=I2ICV6_9BURK
anamox1_curated_scaffold_2200_15
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13563..14039
DNA (477bp) protein (159aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00037B767E
dimethyladenosine transferase
Displaying 15 items

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