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anamox1_curated_scaffold_2213

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2213_1
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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2..949
DNA (948bp) protein (316aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000366E44F
ACP S-malonyltransferase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_2213_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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951..1691
DNA (741bp) protein (247aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Beggiatoa alba B18LD RepID=I3CGX5_9GAMM
3-oxoacyl-ACP reductase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
anamox1_curated_scaffold_2213_3

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1861..2100
DNA (240bp) protein (80aa)
Acyl carrier protein (ACP) Tax=mine drainage metagenome RepID=T1D5J9_9ZZZZ
Acyl carrier protein (ACP) {ECO:0000313|EMBL:EQD76769.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acpP; acyl carrier protein
anamox1_curated_scaffold_2213_4
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2106..3350
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AIS8_NITEC
beta-ketoacyl synthase
anamox1_curated_scaffold_2213_5
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3364..4752
DNA (1389bp) protein (463aa)
hypothetical protein Tax=Xanthomonas sacchari RepID=UPI000262B126
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC45645.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
anamox1_curated_scaffold_2213_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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4749..5609
DNA (861bp) protein (287aa)
hypothetical protein Tax=Pseudomonas thermotolerans RepID=UPI0003735B23
pabC; 4-amino-4-deoxychorismate lyase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_2213_7
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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5602..6624
DNA (1023bp) protein (341aa)
Periplasmic solute-binding protein Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQG5_PSEUP
Uncharacterized protein {ECO:0000313|EMBL:CDH43382.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
periplasmic solute-binding protein
anamox1_curated_scaffold_2213_8
unknown

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comp(6591..7151)
DNA (561bp) protein (187aa)

This feature has no annotations

anamox1_curated_scaffold_2213_9
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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7247..8248
DNA (1002bp) protein (334aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:AAU91792.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AAU91792.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
DNA polymerase III, delta prime subunit Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q606M1_METCA
anamox1_curated_scaffold_2213_10

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8264..8626
DNA (363bp) protein (121aa)
Type IV pilus assembly PilZ Tax=mine drainage metagenome RepID=T0YT27_9ZZZZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:EQD36318.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pilZ; putative type 4 pili assembly protein PilZ
anamox1_curated_scaffold_2213_11
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8654..9727)
DNA (1074bp) protein (358aa)
Cyclic nucleotide-binding domain protein Tax=gamma proteobacterium HTCC5015 RepID=B5JWW7_9GAMM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDY85892.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
Cyclic nucleotide-binding domain-containing protein
anamox1_curated_scaffold_2213_12

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comp(9815..11860)
DNA (2046bp) protein (682aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
Multifunctional fatty acid oxidation complex subunit alpha Tax=mine drainage metagenome RepID=T1AB02_9ZZZZ
Multifunctional fatty acid oxidation complex subunit alpha {ECO:0000313|EMBL:EQD57906.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anamox1_curated_scaffold_2213_13

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comp(11881..12675)
DNA (795bp) protein (265aa)
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EQD57907.1}; EC=3.1.4.12 {ECO:0000313|EMBL:EQD57907.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Endonuclease/exonuclease/phosphatase Tax=mine drainage metagenome RepID=T1AKM3_9ZZZZ
endonuclease/exonuclease/phosphatase
anamox1_curated_scaffold_2213_14

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12803..13255
DNA (453bp) protein (151aa)
Nuclease Tax=mine drainage metagenome RepID=T0ZYC3_9ZZZZ
Nuclease {ECO:0000313|EMBL:EQD33704.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anamox1_curated_scaffold_2213_15
unknown

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comp(13273..13623)
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying 15 items

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