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anamox1_curated_scaffold_2305

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2305_1
Acinetobacter nectaris, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..577
DNA (576bp) protein (192aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter nectaris CIP 110549.;"
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase Tax=Acinetobacter nectaris CIP 110549 RepID=V2TT02_9GAMM
anamox1_curated_scaffold_2305_2
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

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614..976
DNA (363bp) protein (121aa)
Tax=RBG_16_Chloroflexi_50_11_curated
anamox1_curated_scaffold_2305_3

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comp(961..1515)
DNA (555bp) protein (185aa)
Oligoribonuclease Tax=mine drainage metagenome RepID=T1AFQ1_9ZZZZ
Oligoribonuclease {ECO:0000313|EMBL:EQD39869.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
oligoribonuclease
anamox1_curated_scaffold_2305_4

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1573..2385
DNA (813bp) protein (271aa)
GTPase EngC {ECO:0000313|EMBL:EQD63465.1}; EC=3.6.1.- {ECO:0000313|EMBL:EQD63465.1};; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GTPase EngC (Fragment) Tax=mine drainage metagenome RepID=T1CAE2_9ZZZZ
GTPase RsgA
anamox1_curated_scaffold_2305_5

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comp(2399..2998)
DNA (600bp) protein (200aa)
Recombination protein RecR Tax=uncultured bacterium RepID=K2B000_9BACT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
recR; recombination protein RecR
anamox1_curated_scaffold_2305_6

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comp(3011..3337)
DNA (327bp) protein (109aa)
Protein belonging to Uncharacterized protein family UPF0133 Tax=mine drainage metagenome RepID=T1DG58_9ZZZZ
Protein belonging to Uncharacterized protein family UPF0133 {ECO:0000313|EMBL:EQD80314.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
conserved hypothetical protein
anamox1_curated_scaffold_2305_7
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3359..4930)
DNA (1572bp) protein (524aa)
DNA polymerase III, tau and gamma subunits DNA elongation factor III {ECO:0000313|EMBL:CDH45061.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDH45061.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037044B4
DNA polymerase III subunit gamma/tau
anamox1_curated_scaffold_2305_trna_1
unknown

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comp(5144..5232)
DNA (89bp)
transferRNA Ser
anamox1_curated_scaffold_2305_8
unknown

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comp(5263..5541)
DNA (279bp) protein (93aa)

This feature has no annotations

anamox1_curated_scaffold_2305_9
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5538..6419)
DNA (882bp) protein (294aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
4-hydroxy-tetrahydrodipicolinate synthase Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=DAPA_ALKEH
anamox1_curated_scaffold_2305_10

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6559..7116
DNA (558bp) protein (186aa)
Amino acid-binding ACT domain-containing protein Tax=uncultured bacterium RepID=I7FKJ9_9BACT
Amino acid-binding ACT domain-containing protein {ECO:0000313|EMBL:AFP20561.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
amino acid-binding ACT domain-containing protein
anamox1_curated_scaffold_2305_11

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7151..7618
DNA (468bp) protein (156aa)
Alkyl hydroperoxide reductase Tax=uncultured bacterium RepID=I7EPI0_9BACT
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AFP20560.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
anti-oxidant AhpCTSA family protein
anamox1_curated_scaffold_2305_12
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7596..9050
DNA (1455bp) protein (485aa)
PhoH-like protein Tax=Nitrosococcus oceani RepID=Q3JBT5_NITOC
PhoH-like protein
PhoH-like protein {ECO:0000313|EMBL:ABA57711.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
anamox1_curated_scaffold_2305_13
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9065..10612
DNA (1548bp) protein (516aa)
Putative beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z9C7_9GAMM
peptidase M48 Ste24p
anamox1_curated_scaffold_2305_14
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10666..11397
DNA (732bp) protein (244aa)
Lipoprotein Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YIA8_METFJ
Lipoprotein
Lipoprotein {ECO:0000313|EMBL:AFJ02651.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
anamox1_curated_scaffold_2305_15
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11407..11736)
DNA (330bp) protein (110aa)
Sulfate transporter/antisigma-factor antagonist STAS Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E4H0_9GAMM
Sulfate transporter/antisigma-factor antagonist STAS {ECO:0000313|EMBL:EGZ47372.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
anti-sigma-factor antagonist
anamox1_curated_scaffold_2305_16

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comp(11751..12461)
DNA (711bp) protein (237aa)
Toluene tolerance Tax=mine drainage metagenome RepID=T1C4X3_9ZZZZ
Toluene tolerance {ECO:0000313|EMBL:EQD60364.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
organic solvent resistance ABC transporter auxiliary protein
anamox1_curated_scaffold_2305_17

Not on your lists

comp(12461..12988)
DNA (528bp) protein (176aa)
Mammalian cell entry related domain protein (Fragment) Tax=mine drainage metagenome RepID=T0ZPG4_9ZZZZ
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EQD46548.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_2305_18
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13003..13770)
DNA (768bp) protein (256aa)
ABC transporter permease Tax=Thiobacillus denitrificans RepID=UPI000378D033
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
anamox1_curated_scaffold_2305_19
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13767..14981)
DNA (1215bp) protein (405aa)
ABC transporter Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0P1_9GAMM
toluene ABC transporter ATP-binding protein
ABC transporter {ECO:0000313|EMBL:EHQ51378.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
anamox1_curated_scaffold_2305_20
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

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15080..15526
DNA (447bp) protein (149aa)
hypothetical protein Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00031C22DA
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EMD82355.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
aminoglycoside phosphotransferase
Displaying 21 items

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