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anamox1_curated_scaffold_2928

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2928_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1227)
DNA (1227bp) protein (409aa)
Uncharacterized protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRN3_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI98119.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
anamox1_curated_scaffold_2928_2

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comp(1331..1756)
DNA (426bp) protein (142aa)
Biopolymer transport protein ExbD/TolR (Fragment) Tax=mine drainage metagenome RepID=T0YSI1_9ZZZZ
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EQD36083.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
biopolymer transport protein ExbD/TolR
anamox1_curated_scaffold_2928_3
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1775..2212)
DNA (438bp) protein (146aa)
biopolymer transporter ExbD Tax=Ideonella sp. B508-1 RepID=UPI0003B3981E
exbD; biopolymer transport ExbD protein
Biopolymer transport ExbD protein {ECO:0000313|EMBL:ACI98117.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
anamox1_curated_scaffold_2928_4

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comp(2244..3002)
DNA (759bp) protein (253aa)
Biopolymer transport ExbB protein Tax=mine drainage metagenome RepID=T0Y4C0_9ZZZZ
Biopolymer transport ExbB protein {ECO:0000313|EMBL:EQD29921.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
exbB; biopolymer transport protein ExbB
anamox1_curated_scaffold_2928_5

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comp(3052..3684)
DNA (633bp) protein (211aa)
Protein containing TonB Tax=mine drainage metagenome RepID=T0ZJD2_9ZZZZ
Protein containing TonB {ECO:0000313|EMBL:EQD29920.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
tonB; protein TonB
anamox1_curated_scaffold_2928_6
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4012..5700)
DNA (1689bp) protein (563aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
Dihydroxy-acid dehydratase Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XH10_METNJ
anamox1_curated_scaffold_2928_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5920..7320)
DNA (1401bp) protein (467aa)
pepB; leucyl aminopeptidase (EC:3.4.11.23)
Leucyl aminopeptidase PepB, putative {ECO:0000313|EMBL:ACI99717.1}; EC=3.4.11.23 {ECO:0000313|EMBL:ACI99717.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Leucyl aminopeptidase PepB, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPL5_RHOCS
anamox1_curated_scaffold_2928_8
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7672..8667
DNA (996bp) protein (332aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
ketol-acid reductoisomerase Tax=Arenimonas oryziterrae RepID=UPI0003B68430
anamox1_curated_scaffold_2928_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8702..10285
DNA (1584bp) protein (528aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
2-isopropylmalate synthase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBI1_ANADF
2-isopropylmalate synthase
anamox1_curated_scaffold_2928_10
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10328..11119
DNA (792bp) protein (264aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit Tax=Cystobacter fuscus DSM 2262 RepID=S9PQ25_9DELT
Displaying 10 items

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