ggKbase home page

anamox1_curated_scaffold_8220

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_8220_1
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..360
DNA (360bp) protein (120aa)
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W071_MAGSA
succinate dehydrogenase/fumarate reductase, cytochrome b subunit
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit {ECO:0000313|EMBL:BAE52754.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
anamox1_curated_scaffold_8220_2
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

357..743
DNA (387bp) protein (129aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein Tax=Oceanibaculum indicum P24 RepID=K2K220_9PROT
succinate dehydrogenase
Succinate dehydrogenase {ECO:0000313|EMBL:AHK79541.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
anamox1_curated_scaffold_8220_3
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

740..2524
DNA (1785bp) protein (595aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
fumarate reductase (EC:1.3.99.1)
succinate dehydrogenase Tax=Arhodomonas aquaeolei RepID=UPI00036A60BF
anamox1_curated_scaffold_8220_4
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2524..3309
DNA (786bp) protein (262aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
succinate dehydrogenase iron-sulfur subunit Tax=Singularimonas variicoloris RepID=UPI00036A0789
sdhB; Succinate dehydrogenase iron-sulfur subunit
anamox1_curated_scaffold_8220_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3318..3602
DNA (285bp) protein (95aa)
TPR repeat protein Tax=Cycloclasticus RepID=K0C1A7_CYCSP
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
anamox1_curated_scaffold_8220_6

Not on your lists

4048..4656
DNA (609bp) protein (203aa)
RNA polymerase sigma factor RpoE (Fragment) Tax=mine drainage metagenome RepID=T1CGG0_9ZZZZ
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EQD66155.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RNA polymerase sigma factor RpoE
anamox1_curated_scaffold_8220_7
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4653..4904
DNA (252bp) protein (84aa)
Anti sigma-E protein RseA-like Tax=Nitrococcus mobilis Nb-231 RepID=A4BRY9_9GAMM
Anti sigma-E protein RseA-like {ECO:0000313|EMBL:EAR21468.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
putative negative regulator of sigma E activity
Displaying 7 items

View Taxonomy