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anamox1_curated_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_250_1
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2220)
DNA (2220bp) protein (740aa)
primosome assembly protein PriA Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000365B908
primosomal protein N'
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_250_2
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

2543..3199
DNA (657bp) protein (219aa)
Putative 3-methyladenine DNA glycosylase bin=GWC2_Nitrospirae-rel_56_14 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
DNA-3-methyladenine glycosylase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
anamox1_curated_scaffold_250_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3135..3785)
DNA (651bp) protein (217aa)
carbonate dehydratase Tax=Meiothermus timidus RepID=UPI00035C72CA
carbonate dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
anamox1_curated_scaffold_250_4
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3926..4600
DNA (675bp) protein (225aa)
HNH endonuclease family protein Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0E006_THIND
HNH endonuclease family protein
HNH endonuclease family protein {ECO:0000313|EMBL:AGA35179.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
anamox1_curated_scaffold_250_5

Not on your lists

4609..5496
DNA (888bp) protein (296aa)
DNA polymerase I (Fragment) Tax=mine drainage metagenome RepID=T0ZY85_9ZZZZ
DNA polymerase I {ECO:0000313|EMBL:EQD34895.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
5'-3' exonuclease
anamox1_curated_scaffold_250_6
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5549..7747
DNA (2199bp) protein (733aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI00036C0D90
acetate/CoA ligase
anamox1_curated_scaffold_250_7
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7881..10061
DNA (2181bp) protein (727aa)
Hydroxylamine reductase bin=GWF1_Xanthomonadales_69_6 species=Kangiella koreensis genus=Kangiella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hydroxylamine reductase - like protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
anamox1_curated_scaffold_250_8
unknown

Not on your lists

10084..10245
DNA (162bp) protein (54aa)

This feature has no annotations

anamox1_curated_scaffold_250_9

Not on your lists

10242..11510
DNA (1269bp) protein (423aa)
hypothetical protein Tax=Pseudomonas pelagia RepID=UPI00039CBE46
Uncharacterized protein {ECO:0000313|EMBL:KKO12890.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
anamox1_curated_scaffold_250_10
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11563..13086)
DNA (1524bp) protein (508aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L592_FRAAD
hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily {ECO:0000313|EMBL:AFC85049.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
anamox1_curated_scaffold_250_11
Sterolibacterium denitrificans, Sterolibacterium, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13224..16184
DNA (2961bp) protein (987aa)
Putative steroid C25 dehydrogenase-like alpha-subunit Tax=Sterolibacterium denitrificans RepID=H9NNA1_9RHOO
Putative steroid C25 dehydrogenase-like alpha-subunit {ECO:0000313|EMBL:AFF61337.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sterolibacterium.;" source="Sterolibacterium denitrificans.;"
ddhA; Dimethylsulfide dehydrogenase subunit alpha
anamox1_curated_scaffold_250_12
Sterolibacterium denitrificans, Sterolibacterium, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16195..17232
DNA (1038bp) protein (346aa)
Putative steroid C25 dehydrogenase-like beta-subunit Tax=Sterolibacterium denitrificans RepID=H9NNA2_9RHOO
Putative steroid C25 dehydrogenase-like beta-subunit {ECO:0000313|EMBL:AFF61338.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sterolibacterium.;" source="Sterolibacterium denitrificans.;"
ddhB; Dimethylsulfide dehydrogenase subunit beta
anamox1_curated_scaffold_250_13
Sterolibacterium denitrificans, Sterolibacterium, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17237..17779
DNA (543bp) protein (181aa)
Putative steroid C25 dehydrogenase-like gamma-subunit Tax=Sterolibacterium denitrificans RepID=H9NNA3_9RHOO
Putative steroid C25 dehydrogenase-like gamma-subunit {ECO:0000313|EMBL:AFF61339.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sterolibacterium.;" source="Sterolibacterium denitrificans.;"
ddhC; dimethylsulfide dehydrogenase subunit gamma
anamox1_curated_scaffold_250_14

Not on your lists

17761..18252
DNA (492bp) protein (164aa)
Marine sediment metagenome DNA, contig: S01H1_S26322 {ECO:0000313|EMBL:GAG41560.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox1_curated_scaffold_250_15
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18230..18904
DNA (675bp) protein (225aa)
Transcriptional regulator, TetR family Tax=marine gamma proteobacterium HTCC2148 RepID=B7S347_9GAMM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEB76926.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
TetR family transcriptional regulator
anamox1_curated_scaffold_250_16
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18966..19772)
DNA (807bp) protein (269aa)
Uncharacterized protein Tax=Oceanicola granulosus HTCC2516 RepID=Q2CDX3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAR50855.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
zinc/iron permease
anamox1_curated_scaffold_250_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19906..22086)
DNA (2181bp) protein (727aa)
NHL repeat containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XAQ9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
anamox1_curated_scaffold_250_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22239..24209
DNA (1971bp) protein (657aa)
Putative binding protein component of ABC transporter Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SM59_METPP
binding protein component of ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox1_curated_scaffold_250_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24227..25165
DNA (939bp) protein (313aa)
IM pore protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SM58_METPP
nikB; IM pore protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox1_curated_scaffold_250_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25249..26205
DNA (957bp) protein (319aa)
IM pore protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SM57_METPP
nikC; IM pore protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox1_curated_scaffold_250_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26210..27934
DNA (1725bp) protein (575aa)
putative ABC transporter ATP-binding protein (EC:3.6.3.25)
ABC transporter ATP-binding protein Tax=Janthinobacterium lividum RepID=UPI000287F8B3
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox1_curated_scaffold_250_22
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27993..28919
DNA (927bp) protein (309aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI000349EEF2
Uncharacterized protein {ECO:0000313|EMBL:KJS05105.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
NAD-dependent epimerase/dehydratase
anamox1_curated_scaffold_250_23
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28962..30056)
DNA (1095bp) protein (365aa)
Cytochrome b561 family protein Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KP59_MICAA
cytochrome b561 family protein
Cytochrome b561 family protein {ECO:0000313|EMBL:AEP08567.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
anamox1_curated_scaffold_250_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30162..30545
DNA (384bp) protein (128aa)
invasion gene expression up-regulator, SirB Tax=Thiobacillus denitrificans RepID=UPI00036851A3
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
anamox1_curated_scaffold_250_25
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(30559..31875)
DNA (1317bp) protein (439aa)
Major facilitator superfamily MFS_1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YS85_9CHLB
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EAT59105.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
major facilitator superfamily protein
anamox1_curated_scaffold_250_26
unknown

Not on your lists

comp(31884..32645)
DNA (762bp) protein (254aa)

This feature has no annotations

anamox1_curated_scaffold_250_27
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32626..33717)
DNA (1092bp) protein (364aa)
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
Ferrochelatase Tax=Marichromatium purpuratum 984 RepID=F9U1Z4_MARPU
anamox1_curated_scaffold_250_28
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33816..34526)
DNA (711bp) protein (237aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase Tax=alpha proteobacterium BAL199 RepID=A8TR95_9PROT
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EDP64819.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
anamox1_curated_scaffold_250_29
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34555..35841)
DNA (1287bp) protein (429aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EKX84263.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EKX84263.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
Acetyl-CoA acetyltransferase Tax=Pseudomonas putida CSV86 RepID=L1LZ37_PSEPU
acetyl-CoA acetyltransferase
anamox1_curated_scaffold_250_30
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35905..37281
DNA (1377bp) protein (459aa)
Putative efflux protein, MATE family Tax=Rhodanobacter sp. 115 RepID=I4WTU8_9GAMM
Putative Multidrug resistance protein pmpM {ECO:0000313|EMBL:CDI03647.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
multidrug resistance protein MATE family
Displaying items 1-30 of 99 in total

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