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anamox1_curated_scaffold_573

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_573_1
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1545)
DNA (1545bp) protein (515aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
hypothetical protein Tax=Meganema perideroedes RepID=UPI00035E5EF5
dihydrolipoamide dehydrogenase
anamox1_curated_scaffold_573_2

Not on your lists

comp(1542..2054)
DNA (513bp) protein (171aa)
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) Tax=mine drainage metagenome RepID=T0ZQ37_9ZZZZ
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) {ECO:0000313|EMBL:EQD46597.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anamox1_curated_scaffold_573_3
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2832..5594)
DNA (2763bp) protein (921aa)
pyruvate dehydrogenase E1 component (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
Pyruvate dehydrogenase E1 component Tax=Thiocapsa marina 5811 RepID=F9UG40_9GAMM
anamox1_curated_scaffold_573_4
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5645..7147
DNA (1503bp) protein (501aa)
Cytosol aminopeptidase family protein Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JKR3_9GAMM
peptidase M17
Tax=RBG_16_Gamma2_60_9_curated
anamox1_curated_scaffold_573_5
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7144..8181
DNA (1038bp) protein (346aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase Tax=Thauera phenylacetica B4P RepID=N6ZKD4_9RHOO
Tax=GWA2_Rhodocyclales_65_20_curated
anamox1_curated_scaffold_573_6

Not on your lists

8178..8900
DNA (723bp) protein (241aa)
Ribonuclease T {ECO:0000313|EMBL:EQD33564.1}; EC=3.1.13.- {ECO:0000313|EMBL:EQD33564.1};; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Ribonuclease T (Fragment) Tax=mine drainage metagenome RepID=T0ZY15_9ZZZZ
ribonuclease T
anamox1_curated_scaffold_573_7
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8905..9237)
DNA (333bp) protein (111aa)
Glutaredoxin-4 Tax=Methyloglobulus morosus KoM1 RepID=V5BYH5_9GAMM
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
grxD; glutaredoxin-4
anamox1_curated_scaffold_573_8
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9259..9594)
DNA (336bp) protein (112aa)
Transport-associated protein Tax=Burkholderia sp. (strain 383) RepID=Q390I0_BURS3
transport-associated protein
Transport-associated protein {ECO:0000313|EMBL:ABB13136.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
anamox1_curated_scaffold_573_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

9765..10616
DNA (852bp) protein (284aa)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) Tax=Thiothrix nivea DSM 5205 RepID=I3BWP0_9GAMM
nicotinate-nucleotide pyrophosphorylase
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:AIE83654.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox1_curated_scaffold_573_10
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10654..11766)
DNA (1113bp) protein (371aa)
HDOD domain protein Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI34_XANCI
HDOD domain protein {ECO:0000313|EMBL:CCG38009.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
putative signal transduction protein
anamox1_curated_scaffold_573_11

Not on your lists

comp(11778..14450)
DNA (2673bp) protein (891aa)
Sensory box protein/GGDEF family protein (Fragment) Tax=mine drainage metagenome RepID=T1CAR8_9ZZZZ
Sensory box protein/GGDEF family protein {ECO:0000313|EMBL:EQD62724.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase
anamox1_curated_scaffold_573_12
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14608..16326)
DNA (1719bp) protein (573aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
glycosyl transferase family protein
Tax=GWF1_Xanthomonadales_69_6_curated
anamox1_curated_scaffold_573_13
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16338..17084)
DNA (747bp) protein (249aa)
Glycosyl transferase family protein Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE2_9GAMM
glycosyl transferase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
anamox1_curated_scaffold_573_14

Not on your lists

comp(17090..17845)
DNA (756bp) protein (252aa)
Protein containing DUF374 (Fragment) Tax=mine drainage metagenome RepID=T1C775_9ZZZZ
Protein containing DUF374 {ECO:0000313|EMBL:EQD61139.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_573_15
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17970..19967
DNA (1998bp) protein (666aa)
AMP-dependent synthetase and ligase Tax=Cycloclasticus sp. (strain P1) RepID=K0C6T1_CYCSP
AMP-dependent synthetase and ligase
Tax=RBG_16_Gamma2_60_9_curated
anamox1_curated_scaffold_573_16
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19937..20371)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Marinobacterium rhizophilum RepID=UPI000360CD8F
OsmC-like protein {ECO:0000313|EMBL:KGE04657.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
OsmC-like protein
anamox1_curated_scaffold_573_17
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20426..23518)
DNA (3093bp) protein (1031aa)
Acriflavin resistance protein Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFL5_SPHWW
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABQ71081.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
anamox1_curated_scaffold_573_18
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23515..24678)
DNA (1164bp) protein (388aa)
Probable Co/Zn/Cd efflux system membrane fusion protein Tax=Sphingobium japonicum BiD32 RepID=N1MJD2_9SPHN
Probable Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:CCW16874.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hlyD; HlyD-family secretion protein
anamox1_curated_scaffold_573_19
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(24644..24952)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Rhodanobacter sp. 115 RepID=I4WFH7_9GAMM
membrane protein
Membrane protein {ECO:0000313|EMBL:AKC83701.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
anamox1_curated_scaffold_573_trna_3
unknown

Not on your lists

comp(25025..25097)
DNA (73bp)
transferRNA Thr
anamox1_curated_scaffold_573_20

Not on your lists

comp(25135..25485)
DNA (351bp) protein (117aa)
Ferric uptake regulator family protein Tax=mine drainage metagenome RepID=T1B141_9ZZZZ
Ferric uptake regulator family protein {ECO:0000313|EMBL:EQD48060.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Fur family ferric uptake regulator
anamox1_curated_scaffold_573_21
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25711..26253
DNA (543bp) protein (181aa)
Type IV pilus minor pilin FimU Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2K9_PELCD
fimU; type IV pilus minor pilin FimU
Type IV pilus minor pilin FimU {ECO:0000313|EMBL:ABA89398.2}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
anamox1_curated_scaffold_573_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26250..26807
DNA (558bp) protein (186aa)
Type IV pilus modification protein PilV Tax=Methylobacter tundripaludum SV96 RepID=G3IUE4_9GAMM
type IV pilus modification protein PilV
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox1_curated_scaffold_573_23
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26815..27909
DNA (1095bp) protein (365aa)
Pilin-like protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CL7_METCA
pilin-like protein
Pilin-like protein {ECO:0000313|EMBL:AAU90738.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
anamox1_curated_scaffold_573_24
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27921..28436
DNA (516bp) protein (172aa)
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
anamox1_curated_scaffold_573_25
Marinobacter sp. EN3, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28448..31846
DNA (3399bp) protein (1133aa)
Uncharacterized protein Tax=Marinobacter sp. EN3 RepID=U7HLV4_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ERS11053.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. EN3.;"
Tfp pilus assembly protein tip-associated adhesin PilY1-like
anamox1_curated_scaffold_573_26
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31852..32793)
DNA (942bp) protein (314aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Singularimonas variicoloris RepID=UPI000365108C
anamox1_curated_scaffold_573_27
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32804..33328)
DNA (525bp) protein (175aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Lipoprotein signal peptidase Tax=gamma proteobacterium IMCC2047 RepID=F3KBM9_9GAMM
signal peptidase
anamox1_curated_scaffold_573_28
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33328..36189)
DNA (2862bp) protein (954aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Isoleucine--tRNA ligase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BY94_NITHN
isoleucyl-tRNA synthetase
anamox1_curated_scaffold_573_29
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36186..37124)
DNA (939bp) protein (313aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J1C1_9GAMM
riboflavin biosynthesis protein RibF
Displaying items 1-30 of 63 in total

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