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anamox1_curated_scaffold_643

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_643_1

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2..328
DNA (327bp) protein (109aa)
Translation initiation factor IF-1 Tax=mine drainage metagenome RepID=T1BBI4_9ZZZZ
Translation initiation factor IF-1 {ECO:0000313|EMBL:EQD67217.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
infA; translation initiation factor IF-1
anamox1_curated_scaffold_643_2
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(348..2621)
DNA (2274bp) protein (758aa)
ATP-dependent Clp protease, ATP-binding subunit ClpA Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSL5_THISH
ClpA, ATP-dependent Clp protease ATP-binding subunit {ECO:0000313|EMBL:KFZ91261.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
ATP-dependent Clp protease, ATP-binding subunit ClpA
anamox1_curated_scaffold_643_3

Not on your lists

comp(2626..2946)
DNA (321bp) protein (107aa)
ATP-dependent Clp protease adaptor protein ClpS Tax=mine drainage metagenome RepID=T1AY04_9ZZZZ
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:EQD61228.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ATP-dependent Clp protease adaptor protein ClpS
anamox1_curated_scaffold_643_4

Not on your lists

3078..4049
DNA (972bp) protein (324aa)
General secretion pathway protein C Tax=mine drainage metagenome RepID=T1C4R1_9ZZZZ
General secretion pathway protein C {ECO:0000313|EMBL:EQD80471.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_643_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4083..6134
DNA (2052bp) protein (684aa)
General secretion pathway protein D Tax=sulfur-oxidizing symbionts RepID=G2FHJ0_9GAMM
Putative general secretion pathway protein {ECO:0000313|EMBL:CDH44363.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
general secretion pathway protein D
anamox1_curated_scaffold_643_6
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6131..7615
DNA (1485bp) protein (495aa)
Type II secretion system protein E Tax=Salinisphaera shabanensis E1L3A RepID=F7Q2Y1_9GAMM
general secretion pathway protein GspE
General secretion pathway protein GspE {ECO:0000313|EMBL:AHK78057.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
anamox1_curated_scaffold_643_7

Not on your lists

7619..8833
DNA (1215bp) protein (405aa)
General secretion pathway protein F Tax=mine drainage metagenome RepID=T1AEY2_9ZZZZ
General secretion pathway protein F {ECO:0000313|EMBL:EQD40495.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
general secretion pathway protein F
anamox1_curated_scaffold_643_8
unknown

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comp(8823..9095)
DNA (273bp) protein (91aa)

This feature has no annotations

anamox1_curated_scaffold_643_9
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9163..9786)
DNA (624bp) protein (208aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida.;"
LexA repressor Tax=Aeromonas salmonicida RepID=LEXA_AERS4
lexA; LexA repressor
anamox1_curated_scaffold_643_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10156..10470
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=gamma proteobacterium HdN1 RepID=E1VFL7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL47369.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
anamox1_curated_scaffold_643_11
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10546..11508)
DNA (963bp) protein (321aa)
3-oxoacyl-ACP synthase (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G5J6_9GAMM
anamox1_curated_scaffold_643_12
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11508..12512)
DNA (1005bp) protein (335aa)
Phosphate acyltransferase Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E225_9GAMM
phosphate acyltransferase
Tax=RBG_16_Gamma2_64_10_curated
anamox1_curated_scaffold_643_13
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12568..12756)
DNA (189bp) protein (63aa)
50S ribosomal protein L32 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DWL2_9GAMM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
50S ribosomal protein L32
anamox1_curated_scaffold_643_14
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12782..13297)
DNA (516bp) protein (172aa)
Metal-binding protein Tax=Pseudomonas sp. (strain M1) RepID=L1HNT9_PSEUO
hypothetical protein
Metal-binding protein {ECO:0000313|EMBL:KES25449.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
anamox1_curated_scaffold_643_15

Not on your lists

13404..13967
DNA (564bp) protein (188aa)
Maf-like protein Tax=mine drainage metagenome RepID=T1AT55_9ZZZZ
Maf-like protein {ECO:0000313|EMBL:EQD43929.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
maf protein
anamox1_curated_scaffold_643_16
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13955..14923)
DNA (969bp) protein (323aa)
Pseudouridine synthase Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQ71_ALLVD
RluA family pseudouridine synthase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_643_17
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15412..17805
DNA (2394bp) protein (798aa)
Ribonuclease E Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GR18_THISH
ribonuclease E
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_643_18
unknown

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comp(17836..18579)
DNA (744bp) protein (248aa)

This feature has no annotations

anamox1_curated_scaffold_643_19
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18661..19125)
DNA (465bp) protein (155aa)
ptpA; Low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:CDK99478.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CDK99478.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Low molecular weight protein-tyrosine-phosphatase Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F4Q6_9PROT
anamox1_curated_scaffold_643_20
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19122..19919)
DNA (798bp) protein (266aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
3-deoxy-manno-octulosonate cytidylyltransferase Tax=Marinobacterium stanieri RepID=UPI000255A871
anamox1_curated_scaffold_643_21

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comp(19921..20109)
DNA (189bp) protein (63aa)
Protein containing DUF343 Tax=mine drainage metagenome RepID=T0ZK98_9ZZZZ
Protein containing DUF343 {ECO:0000313|EMBL:EQD29149.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_643_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20094..21104)
DNA (1011bp) protein (337aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Tetraacyldisaccharide 4'-kinase Tax=Rhodanobacter denitrificans RepID=M4NP94_9GAMM
tetraacyldisaccharide 4''-kinase
anamox1_curated_scaffold_643_23

Not on your lists

comp(21123..22871)
DNA (1749bp) protein (583aa)
MsbA Tax=uncultured bacterium 9F08 RepID=D2XIQ9_9BACT
MsbA {ECO:0000313|EMBL:ADB12520.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 9F08.;"
ABC transporter permease
anamox1_curated_scaffold_643_24
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22868..23305)
DNA (438bp) protein (146aa)
biopolymer transportern ExbD Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000369F135
biopolymer transport protein ExbD/TolR
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
anamox1_curated_scaffold_643_25
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23302..23925)
DNA (624bp) protein (208aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI0003777443
biopolymer transporter ExbB
Biopolymer transporter ExbB {ECO:0000313|EMBL:AHK78885.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
anamox1_curated_scaffold_643_26
Sporothrix schenckii, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

24645..25358
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) RepID=U7PS25_SPOS1
Uncharacterized protein {ECO:0000313|EMBL:ERS98377.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; mitosporic Ophiostomataceae; Sporothrix.;" source="Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183); (Rose-picker's disease fungus).;"
anamox1_curated_scaffold_643_27
unknown

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25583..26323
DNA (741bp) protein (247aa)

This feature has no annotations

anamox1_curated_scaffold_643_28

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26338..26856
DNA (519bp) protein (173aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T0Z6E6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD40608.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_643_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26845..27567)
DNA (723bp) protein (241aa)
ABC transporter Tax=Singularimonas variicoloris RepID=UPI00036203C0
lipoprotein releasing system, ATP-binding protein
Tax=RBG_16_Gamma2_65_34_curated
anamox1_curated_scaffold_643_30
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27560..28831)
DNA (1272bp) protein (424aa)
cell division protein FtsX Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003606D97
lipoprotein releasing system transmembrane protein LolC/E family
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:ACL72450.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Displaying items 1-30 of 37 in total

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