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anamox1_curated_scaffold_853

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_853_1
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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1..564
DNA (564bp) protein (188aa)
Bifunctional: folylpolyglutamate synthase dihydrofolate synthase {ECO:0000313|EMBL:CDI01892.1}; EC=6.3.2.12 {ECO:0000313|EMBL:CDI01892.1};; EC=6.3.2.17 {ECO:0000313|EMBL:CDI01892.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
Folylpolyglutamate synthase/dihydrofolate synthase bifunctional protein (EC:6.3.2.17)
Folylpolyglutamate synthase/dihydrofolate synthase bifunctional protein Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RU25_XANCB
anamox1_curated_scaffold_853_2
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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545..1174
DNA (630bp) protein (210aa)
Sporulation domain-containing protein Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G2R4_9GAMM
Sporulation domain-containing protein {ECO:0000313|EMBL:EHQ52101.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
sporulation domain-containing protein
anamox1_curated_scaffold_853_3

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1241..1735
DNA (495bp) protein (165aa)
CvpA family protein Tax=mine drainage metagenome RepID=T1B798_9ZZZZ
CvpA family protein {ECO:0000313|EMBL:EQD48874.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
colicin V production protein CvpA
anamox1_curated_scaffold_853_4
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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1735..3246
DNA (1512bp) protein (504aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
amidophosphoribosyltransferase Tax=Methylohalobius crimeensis RepID=UPI0003B3071B
anamox1_curated_scaffold_853_5
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3296..4591
DNA (1296bp) protein (432aa)
Uncharacterized protein Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YH69_THIV6
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
anamox1_curated_scaffold_853_6
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4564..5283)
DNA (720bp) protein (240aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
UDP-2,3-diacylglucosamine hydrolase bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
UDP-2,3-diacylglucosamine hydrolase
anamox1_curated_scaffold_853_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5294..5884)
DNA (591bp) protein (197aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Nitrosospira sp. APG3 RepID=M5DV05_9PROT
anamox1_curated_scaffold_853_8
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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5918..7324
DNA (1407bp) protein (469aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
glutamate--tRNA(Gln) ligase/glutamyl-tRNA synthetase (EC:6.1.1.17 6.1.1.24)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000368F660
anamox1_curated_scaffold_853_9
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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7331..8725
DNA (1395bp) protein (465aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000255|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00041}; Short=CysRS {ECO:0000255|HAMAP-Rule:MF_00041};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
cysteinyl-tRNA synthetase Tax=Methylococcus capsulatus RepID=UPI0002E908CD
anamox1_curated_scaffold_853_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8729..9580)
DNA (852bp) protein (284aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includes:; Methenyltetrahydrofolate cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=3.5.4.9 {ECO:0000255|HAMAP-Rule:MF_01576};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
methenyltetrahydrofolate cyclohydrolase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036CCE19
anamox1_curated_scaffold_853_trna_1
unknown

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9688..9761
DNA (74bp)
transferRNA Pro
anamox1_curated_scaffold_853_trna_2
unknown

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9780..9853
DNA (74bp)
transferRNA Arg
anamox1_curated_scaffold_853_trna_3
unknown

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9887..9959
DNA (73bp)
transferRNA His
anamox1_curated_scaffold_853_trna_4
unknown

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9972..10044
DNA (73bp)
transferRNA Lys
anamox1_curated_scaffold_853_trna_5
unknown

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10153..10234
DNA (82bp)
transferRNA Leu
anamox1_curated_scaffold_853_11

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10277..11587
DNA (1311bp) protein (437aa)
trigger factor Tax=Pseudomonas RepID=UPI0003655551
Uncharacterized protein {ECO:0000313|EMBL:KKO04060.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
trigger factor
anamox1_curated_scaffold_853_12
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11584..12210
DNA (627bp) protein (209aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
ATP-dependent Clp protease proteolytic subunit Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZE4_NITHN
anamox1_curated_scaffold_853_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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12279..13580
DNA (1302bp) protein (434aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CG91_9GAMM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
anamox1_curated_scaffold_853_14
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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13704..16145
DNA (2442bp) protein (814aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
peptidase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000366D123
DNA-binding protein
anamox1_curated_scaffold_853_trna_6
unknown

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16191..16263
DNA (73bp)
transferRNA Val
anamox1_curated_scaffold_853_trna_7
unknown

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16272..16345
DNA (74bp)
transferRNA Asp
anamox1_curated_scaffold_853_15
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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16361..18238
DNA (1878bp) protein (626aa)
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Thiocapsa marina 5811 RepID=F9UBI8_9GAMM
parvulin-like peptidyl-prolyl isomerase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_853_16
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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18259..19593
DNA (1335bp) protein (445aa)
Sodium:dicarboxylate symporter Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR06_OPITP
sodium:dicarboxylate symporter
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ACB73673.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
anamox1_curated_scaffold_853_17
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19601..20398)
DNA (798bp) protein (266aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
enoyl-ACP reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] bin=GWF1_Xanthomonadales_69_6 species=Frateuria aurantia genus=Frateuria taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
anamox1_curated_scaffold_853_18
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20421..22037)
DNA (1617bp) protein (539aa)
Membrane-bound lytic murein transglycosylase D Tax=Alcanivorax pacificus W11-5 RepID=K2FZB6_9GAMM
membrane-bound lytic murein transglycosylase D
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_853_19
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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22123..22842
DNA (720bp) protein (240aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037CFCAA
methylase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_853_20
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22839..23273
DNA (435bp) protein (145aa)
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H {ECO:0000255|HAMAP-Rule:MF_00042}; Short=RNase H {ECO:0000255|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00042};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
RNaseH ribonuclease Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003730A5E
anamox1_curated_scaffold_853_21
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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23283..24047
DNA (765bp) protein (255aa)
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ACE83099.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACE83099.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
DNA polymerase III subunit epsilon Tax=Spongiibacter tropicus RepID=UPI0003B2EB90
anamox1_curated_scaffold_853_22
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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24111..25358
DNA (1248bp) protein (416aa)
Putative UDP-glucose/GDP-mannose dehydrogenase family protein {ECO:0000313|EMBL:CDI03796.1}; EC=1.1.1.- {ECO:0000313|EMBL:CDI03796.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
Vi polysaccharide biosynthesis protein vipA/tviB Tax=Pusillimonas noertemannii RepID=UPI000309AC24
wbpO; capsular polysaccharide biosynthesis protein
anamox1_curated_scaffold_853_23
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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25374..26393
DNA (1020bp) protein (340aa)
NAD dependent epimerase/dehydratase Tax=Arhodomonas aquaeolei RepID=UPI00037CA608
Capsular polysaccharide biosynthesis protein I {ECO:0000313|EMBL:EAR21708.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
NAD dependent epimerase/dehydratase
Displaying items 1-30 of 33 in total

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