ggKbase home page

anamox1_curated_scaffold_875

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_875_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

2..1732
DNA (1731bp) protein (577aa)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=S9ZMT3_9RHOO
ddhA; Dimethylsulfide dehydrogenase subunit alpha
Tax=RBG_16_Chloroflexi_68_14_curated
anamox1_curated_scaffold_875_2
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1875..2906
DNA (1032bp) protein (344aa)
Putative AraC family transcriptional regulator Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUS2_9SPHN
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:KFG90962.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
transcriptional regulator AraC family
anamox1_curated_scaffold_875_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2912..3685
DNA (774bp) protein (258aa)
oxidoreductase Tax=Sphingomonas sp. KC8 RepID=UPI000248A381
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB56752.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
short chain dehydrogenase family protein
anamox1_curated_scaffold_875_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3682..4128
DNA (447bp) protein (149aa)
Probably subunit of benzoylsuccinyl-CoA thiolase Tax=gamma proteobacterium HdN1 RepID=E1VND1_9GAMM
bbsA; subunit of benzoylsuccinyl-CoA thiolase
Probably subunit of benzoylsuccinyl-CoA thiolase {ECO:0000313|EMBL:CBL46323.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
anamox1_curated_scaffold_875_5
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4125..5306
DNA (1182bp) protein (394aa)
lipid-transfer protein Tax=Spongiibacter tropicus RepID=UPI0003B76C38
Lipid-transfer protein {ECO:0000313|EMBL:EIF44585.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
lipid-transfer protein
anamox1_curated_scaffold_875_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5401..6390
DNA (990bp) protein (330aa)
Alcohol dehydrogenase, zinc-binding domain protein Tax=Sphingomonas wittichii RepID=A5VBP3_SPHWW
alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABQ69709.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
anamox1_curated_scaffold_875_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6401..6766
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBP2_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69708.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
anamox1_curated_scaffold_875_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6759..7463
DNA (705bp) protein (235aa)
stress protein Tax=Sphingomonas sp. KC8 RepID=UPI0002489B8F
stress responsive alpha-beta barrel domain-containing protein
Stress responsive alpha-beta barrel domain protein {ECO:0000313|EMBL:ABQ69707.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
anamox1_curated_scaffold_875_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7453..8421
DNA (969bp) protein (323aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Sulfate adenylyltransferase subunit 2 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFA3_PHEZH
cysD; sulfate adenylyltransferase subunit 2
anamox1_curated_scaffold_875_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8421..10328
DNA (1908bp) protein (636aa)
Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase cysN/C Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFA4_PHEZH
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase cysN/C {ECO:0000313|EMBL:ACG78674.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
anamox1_curated_scaffold_875_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10325..11146
DNA (822bp) protein (274aa)
3'(2'), 5'-bisphosphate nucleotidase Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CGZ7_9GAMM
3'-5'-bisphosphate nucleotidase {ECO:0000313|EMBL:ETW98807.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
3'(2'),5'-bisphosphate nucleotidase
anamox1_curated_scaffold_875_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11181..11543)
DNA (363bp) protein (121aa)
steroid delta-isomerase (EC:5.3.3.1)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N690_9ACTO
Steroid delta-isomerase {ECO:0000313|EMBL:KJZ49412.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
anamox1_curated_scaffold_875_13
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11722..14091
DNA (2370bp) protein (790aa)
TonB-dependent receptor Tax=Sphingomonas sp. KC8 RepID=UPI000248A3AC
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABQ69658.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
anamox1_curated_scaffold_875_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14128..15639)
DNA (1512bp) protein (504aa)
hypothetical protein Tax=Sphingomonas sp. KC8 RepID=UPI000248BBA3
Uncharacterized protein {ECO:0000313|EMBL:GAD48585.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
lipoprotein
anamox1_curated_scaffold_875_15
Pseudomonas sp. GM49, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15642..16574)
DNA (933bp) protein (311aa)
Esterase/lipase Tax=Pseudomonas sp. GM49 RepID=J3G1Z8_9PSED
Esterase/lipase {ECO:0000313|EMBL:EJM51172.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM49.;"
putative esterase
anamox1_curated_scaffold_875_16
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16606..17742)
DNA (1137bp) protein (379aa)
Uncharacterized protein Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AG82_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN46955.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
anamox1_curated_scaffold_875_17
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17747..19306)
DNA (1560bp) protein (520aa)
Putative fatty-acid--CoA ligase Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AMK6_PSERE
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:CDF85640.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
anamox1_curated_scaffold_875_18
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19329..20135
DNA (807bp) protein (269aa)
Short-chain dehydrogenase/reductase SDR Tax=Sphingomonas wittichii RepID=A5VCF3_SPHWW
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB53948.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
short chain dehydrogenase
anamox1_curated_scaffold_875_19
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20164..20745
DNA (582bp) protein (194aa)
Transferase involved in phenylacetate degradation Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2Z1_AZOL4
Phenylacetic acid degradation protein PaaY {ECO:0000313|EMBL:KJR65698.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
paaY; Acetyltransferase PaaY
anamox1_curated_scaffold_875_20
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20793..22277)
DNA (1485bp) protein (495aa)
Fumarate reductase Tax=Ralstonia sp. AU12-08 RepID=S9SX88_9RALS
Fumarate reductase {ECO:0000313|EMBL:EPX94650.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
hypothetical protein
anamox1_curated_scaffold_875_21
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22326..23819)
DNA (1494bp) protein (498aa)
EmrB/QacA family drug resistance transporter Tax=Marinobacter santoriniensis NKSG1 RepID=M7D9G3_9ALTE
EmrB/QacA family drug resistance transporter {ECO:0000313|EMBL:EMP57348.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter santoriniensis NKSG1.;"
EmrB/QacA family drug resistance transporter
anamox1_curated_scaffold_875_22
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23842..24948)
DNA (1107bp) protein (369aa)
Multidrug resistance protein EmrA Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AR78_PSERE
Hemolysin D {ECO:0000313|EMBL:KKC98741.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotolerans.;"
emrA; multidrug resistance protein EmrA
anamox1_curated_scaffold_875_23
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24938..25411)
DNA (474bp) protein (158aa)
Transcriptional regulator, MarR family Tax=alpha proteobacterium JLT2015 RepID=M2SDJ2_9PROT
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EMD83430.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
anamox1_curated_scaffold_875_24
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25697..26617
DNA (921bp) protein (307aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00036A80A0
Uncharacterized protein {ECO:0000313|EMBL:EPZ16108.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
luciferase
anamox1_curated_scaffold_875_25
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26623..29040
DNA (2418bp) protein (806aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000360D4B8
Uncharacterized protein {ECO:0000313|EMBL:EPZ16113.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
anamox1_curated_scaffold_875_26
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

29046..29822
DNA (777bp) protein (259aa)
Amidohydrolase 2 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A9A011_DESOH
amidohydrolase 2
Tax=RBG_13_Chloroflexi_51_52_curated
Displaying 26 items

View Taxonomy