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anamox1_curated_scaffold_3370_7

Organism: anamox1_Proteobacteria_67_8_curated

near complete RP 50 / 55 MC: 1 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 5836..6450

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor Tax=gamma proteobacterium BDW918 RepID=I2JGF5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 183.0
  • Bit_score: 71
  • Evalue 9.10e-10
RNA polymerase sigma factor CarQ {ECO:0000313|EMBL:GAO33746.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.6
  • Coverage: 187.0
  • Bit_score: 91
  • Evalue 1.20e-15
RNA polymerase sigma factor SigM similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 125.0
  • Bit_score: 71
  • Evalue 2.60e-10

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Taxonomy

Ferriphaselus amnicola → Ferriphaselus → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGGACAAGAACGAATTCATGCGGGCCTGCCGCGAGGGTGGCGCGGCCATCGAGGGGGCACTGCGCACGCTCGACCGCTCGTTCTTCGCGCCGCTGTATGCGTATGGGTTGCGCAGCCTGCGCGACCCCGAGCTGGCGCGTGATGCCGTGCAGGAGACGTTCATCAAGGTATGGCGGCGCTGCGCGACCTTCCATGGCGATTCGGAACTGCTGCCATGGATGCAGGCCATCCTGCGACGCACCATCCTCGACCGGCTGCGCCGGCCCGAGCACGAAGTGCCGCTGGACGACGGGTACGAGATGAGTGCGGAGGTGACGCTGCGCCTCCGTGAACTCTCACTCGCCGAGGTATCCCTGCCCGAGGACGACGCCCGCCGAACGCAGCTCGCCGAGTGCTTCGAGCGCTGCTGGAGCCGCTTCGAGCAGGCGGCGCCGGCGCATGCGGCAGTGATCGCCTGGATCGTCGAGGACGGCCTCGACACCGGGGAAATTGCCACGCTCCTCGAACGGACTCCCGGGGCGACGCGCGAATTCATCTCGCAGTGTCGCAAGCGTGCGCGTCTGCATCTCGCCGAGTGGTACGAGCTGGCTTTCGGCTGCGACAGCATCACATGA
PROTEIN sequence
Length: 205
VDKNEFMRACREGGAAIEGALRTLDRSFFAPLYAYGLRSLRDPELARDAVQETFIKVWRRCATFHGDSELLPWMQAILRRTILDRLRRPEHEVPLDDGYEMSAEVTLRLRELSLAEVSLPEDDARRTQLAECFERCWSRFEQAAPAHAAVIAWIVEDGLDTGEIATLLERTPGATREFISQCRKRARLHLAEWYELAFGCDSIT*