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anamox1_curated_scaffold_3370

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3370_1
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1570
DNA (1569bp) protein (523aa)
hypothetical protein Tax=Spongiibacter tropicus RepID=UPI0003B75A9A
TonB-dependent receptor {ECO:0000313|EMBL:EIF44068.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
TonB-dependent receptor
anamox1_curated_scaffold_3370_2
unknown

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1641..2141
DNA (501bp) protein (167aa)

This feature has no annotations

anamox1_curated_scaffold_3370_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2203..2973
DNA (771bp) protein (257aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037A0DF2
oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
anamox1_curated_scaffold_3370_4
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3006..4238
DNA (1233bp) protein (411aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Thioalkalivibrio RepID=UPI00036839AB
anamox1_curated_scaffold_3370_5
unknown

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comp(4285..5409)
DNA (1125bp) protein (375aa)
hypothetical protein Tax=Deinococcus aquatilis RepID=UPI00037F3247
anamox1_curated_scaffold_3370_6
unknown

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comp(5406..5666)
DNA (261bp) protein (87aa)

This feature has no annotations

anamox1_curated_scaffold_3370_7
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5836..6450
DNA (615bp) protein (205aa)
ECF subfamily RNA polymerase sigma-24 factor Tax=gamma proteobacterium BDW918 RepID=I2JGF5_9GAMM
RNA polymerase sigma factor CarQ {ECO:0000313|EMBL:GAO33746.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
RNA polymerase sigma factor SigM
anamox1_curated_scaffold_3370_8
unknown

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6447..7040
DNA (594bp) protein (198aa)

This feature has no annotations

anamox1_curated_scaffold_3370_9
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7037..10366
DNA (3330bp) protein (1110aa)
Tetratricopeptide TPR_2 repeat protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LQE8_SYNFM
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABK19650.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
anamox1_curated_scaffold_3370_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10392..11747)
DNA (1356bp) protein (452aa)
proline aminopeptidase P II Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035E89EA
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ACL73838.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_3370_11
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11726..12286)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000380E913
YecA family protein {ECO:0000313|EMBL:EHQ51570.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
hypothetical protein
anamox1_curated_scaffold_3370_12
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12303..12632
DNA (330bp) protein (110aa)
Putative uncharacterized protein Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C834_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KGI76865.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
anamox1_curated_scaffold_3370_13

Not on your lists

12629..12946
DNA (318bp) protein (106aa)
Cell division protein ZapA-like protein (Fragment) Tax=mine drainage metagenome RepID=T1B7V1_9ZZZZ
Cell division protein ZapA-like protein {ECO:0000313|EMBL:EQD65967.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_3370_14
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13168..13758
DNA (591bp) protein (197aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
5-formyltetrahydrofolate cyclo-ligase
5-formyltetrahydrofolate cyclo-ligase family protein bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
anamox1_curated_scaffold_3370_15
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

Not on your lists

13755..14219
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Amphimedon queenslandica RepID=I1EZR5_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15709291}; species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
hypothetical protein
anamox1_curated_scaffold_3370_16
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14457..15140
DNA (684bp) protein (228aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQX1_ALLVD
anamox1_curated_scaffold_3370_17
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

15356..15724
DNA (369bp) protein (123aa)
Transposase, IS4 family Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AI7_POLSJ
IS4 family transposase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
Displaying 17 items

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