ggKbase home page

anamox1_curated_scaffold_3476_8

Organism: anamox1_Proteobacteria_67_8_curated

near complete RP 50 / 55 MC: 1 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 5536..6180

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA (Fragment) Tax=mine drainage metagenome RepID=T0ZI28_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 180.0
  • Bit_score: 122
  • Evalue 3.60e-25
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:EQD44067.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 180.0
  • Bit_score: 122
  • Evalue 5.10e-25
lipopolysaccharide export system protein LptA similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 131.0
  • Bit_score: 67
  • Evalue 5.10e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 645
ATGGCCACTTCACACCCTGAACCACAGAGGACGCAGCGCATCGCAGCCGCCGCAGCGCTCATTGCCGTGGCACTCGCCACGGTCGCTGCGGCGGCCGGCCCGCAGGTGCGCGCGGAGCCCATCTCCCTCGATGCGGCCTCATCGGAGCTCGACTACCAGACCAGCACCATCGTGTTTCGTGACGTGGTGATCTCGCAGGGCACCGTCCGGGTGGCCGCACGGGAAGCAGAGGCGACGGGGCTCGACTTCGAGAACAGCCGCTGGACTTTCCGTGGCGACGTACGCATCGAAACCGAGGGCGGCCGATTGACCTCCGGTGAGGCGGTCGTGAGCTTCGTCGGCAATGCCATTGCCCGCGCGGAGATCACGGGCTCACCGGCCGAATTCGAGCAGCCTCTCAGGAACCGCACAGCCGTGGCGCGCGGACGCGCCGGTTCGATCCACTACGACGTCGGCGCCGGCACAGTGCGCCTGACACAGGATGCCTGGCTCTCCGACGGCAGCAGCGAGATCCGCGGCCAGACACTCGTCTACGATATCCGCGCGCAGCGCGTGCTCGCCGCGGCTACGCAGGGCGGCAACGACCGCGTGCGCATCACGATCCACCCGCACAGCCCCGCGGGATCGAAGGCGCCTCAGCCATGA
PROTEIN sequence
Length: 215
MATSHPEPQRTQRIAAAAALIAVALATVAAAAGPQVRAEPISLDAASSELDYQTSTIVFRDVVISQGTVRVAAREAEATGLDFENSRWTFRGDVRIETEGGRLTSGEAVVSFVGNAIARAEITGSPAEFEQPLRNRTAVARGRAGSIHYDVGAGTVRLTQDAWLSDGSSEIRGQTLVYDIRAQRVLAAATQGGNDRVRITIHPHSPAGSKAPQP*