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anamox1_curated_scaffold_3476

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3476_1
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..519)
DNA (519bp) protein (173aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit Tax=gamma proteobacterium HIMB55 RepID=H3NY84_9GAMM
ubiquinol-cytochrome c reductase, iron-sulfur subunit
anamox1_curated_scaffold_3476_2
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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636..1436
DNA (801bp) protein (267aa)
Putative uncharacterized protein Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TL16_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM31654.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
anamox1_curated_scaffold_3476_3
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1845..3104)
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0P6_9GAMM
anamox1_curated_scaffold_3476_4
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3191..3382)
DNA (192bp) protein (64aa)
hypothetical protein Tax=beta proteobacterium L13 RepID=UPI000380F854
BolA-like protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
anamox1_curated_scaffold_3476_5
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3593..4468
DNA (876bp) protein (292aa)
arabinose-5-phosphate isomerase (EC:5.3.1.13)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Arabinose 5-phosphate isomerase Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GMJ1_THISH
anamox1_curated_scaffold_3476_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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4717..4995
DNA (279bp) protein (93aa)
Phosphatase, YrbI family Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60AU9_METCA
YrbI family phosphatase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
anamox1_curated_scaffold_3476_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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4992..5555
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0W4_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
anamox1_curated_scaffold_3476_8

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5536..6180
DNA (645bp) protein (215aa)
Lipopolysaccharide transport periplasmic protein LptA (Fragment) Tax=mine drainage metagenome RepID=T0ZI28_9ZZZZ
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:EQD44067.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
lipopolysaccharide export system protein LptA
anamox1_curated_scaffold_3476_9
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6177..6911
DNA (735bp) protein (245aa)
lipopolysaccharide ABC transporter ATP-binding protein Tax=Arenimonas oryziterrae RepID=UPI0003B731D4
Lipopolysaccharide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL37033.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
ABC transporter ATP-binding protein
anamox1_curated_scaffold_3476_10

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6950..8389
DNA (1440bp) protein (480aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase factor sigma-54 (Fragment) Tax=mine drainage metagenome RepID=T1B4I9_9ZZZZ
RNA polymerase factor sigma-54 {ECO:0000313|EMBL:EQD47724.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anamox1_curated_scaffold_3476_11
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8438..8758
DNA (321bp) protein (107aa)
ribosome hibernation promoting factor HPF Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000371D0CE
sigma 54 modulation protein/30S ribosomal protein S30P
Sigma 54 modulation protein / SSU ribosomal protein S30P {ECO:0000313|EMBL:ACL71817.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Displaying 11 items

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