ggKbase home page

anamox1_curated_scaffold_403_42

Organism: anamox1_Proteobacteria_67_8_curated

near complete RP 50 / 55 MC: 1 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 37412..39556

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000368A0EB similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 616.0
  • Bit_score: 810
  • Evalue 7.40e-232
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 617.0
  • Bit_score: 806
  • Evalue 5.10e-231
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 617.0
  • Bit_score: 806
  • Evalue 2.60e-230

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kangiella koreensis → Kangiella → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2145
ATGACTGCACGCAAGCACAAGACCACGCCCGCAGCGAACCGGAAGCACGCGTCCGTCGACAGGAAGCCGGCGACCAGGACGGCACCGAAGAAGTCGGCCGCCACGACTGCGGTACGCAAGGCGCCTCCCCAGAAGGTGAAGGCAAAGCCGACCGCCTCGGCCGGAGCGCCAACGCCACCGGTGAAGCCTGCACCCGCCAGGGGCAGGGTCGCTGAACTCAAGTCCCCGCCGACCACCTCGCCGCAGGCGGTCGACACCCGCAAGCCGGTCGGCCAGGAGCGGCGCGGAATCGCCATGCCGGAGGATCGCCAGTCACAGCTCAAGCTGCTGATTGCGCGCGGCAAGGAACAGGGCTACCTCACCTATTCGCAGGTGAACGACCACCTGCCCTCGGAAATCGTCGATCCGGAGCAGATCGAGGAGATCGTCAACACGATCAATGATATGGGCATCCCGGTGTACGAGAAGGCGCCGGATGCCGAATCACTGCTCGCCACGGAACCGTCCGGCCCCACGGACGAAGAAGCCATCGAGGAAGCCGCGGCCGCACTCGCCGCGCTCGACGCCGAGCTCGGGCGCACCACGGATCCCGTGCGCATGTACATGCGCGAGATGGGGACGGTGGAGCTGCTCACCCGCGAGGGCGAGATCCGCATCGCCAAGCGTATCGAGGAGGGTCTCGATGCCGTGCGGGGTGCACTATCGCTCTATCCGTCGACCCTCGAGTGCCTCCTGAAAGCCTACGAGCCGGTCAAGGGGGGCCAGGCGCGGCTGGTCGACATCATCGTGGGGTTCATCGATCCGAATGCCCCCGATGTCATCGCACAGCCCCAGAATCCGACCAAGATGGAGCTCACCGAAGCCGAGGAAGAAGGCGACGACGAAGAAGAGGGCGACGACGACAGTAGCAGCGACGAAGCCGTCGACACCGGCCCCGATCCGGAGGAGGCAGCGCGCCGCTTCGCCTCGATCGCAAAGCTTCACACGCAGACGCTGACCGCAATTGCCCGGCACGGTGCCGGCGATCCGAAGACCCTCAAGCTGCGCAGGAAGCTCGGGGGCGAGTTCATGGAGCTCAAGCTCTCGCCGCGCATGTTCGACGCGCTCATCCTCAACCTGCGTTCCCACATCTCCGAGGTCCGCCAGCTCGAGAAGGAGATCATGGTCCTTGCCGTGCGCGATGCGGGCATGCCGCGCAAGGACTTCATCACCAGCTTCCCGAAGAACGAGACGAGCTCACGCTGGCTCGCCAGGCACGTCAAGGCCGGCAAGAAGTATTCTGCGGGGCTTGCGCGCCTGAAGGATGAGATCGAGCTGCGACAGCACAGGCTCGAACTGCTCGAGCAGCAGTTCCACCTGTCGGTGCATGACATCAAGGAAATCAACCGCGAGGTTTCCATCGGCGAGGCCAAGGCACGCCGTGCCAAGAAGGAGATGGTCGAGGCCAACCTGCGCCTCGTCATCTCGATCGCCAAGAAGTACACCAACCGCGGATTGCAGTTCCTGGATCTCATCCAGGAAGGCAACATCGGCCTGATGAAGGCCGTCGACAAGTTTGAATACCGGCGCGGCTACAAGTTCTCGACCTATGCGACGTGGTGGATCCGCCAGGCCATCACGCGCTCGATCGCCGACCAGGCACGCACCATCCGCATCCCGGTCCACATGATCGAGACGATCAACAAGCTGAACCGTATCTCGCGCCAGATGCTCCAGGAGATGGGCCGCGAACCCACGCCTGACGAGCTCGCCGTGCGCATGGAGATGCCCGAGGACAAGGTGCGCAAGGTCCTGAAGATCGCCAAGGAACCGATCTCCATGGAGACGCCCATCGGCGACGACGAAGACTCGCACCTGGGCGACTTCATCGAGGACACGTCGGTCACCTCGCCGATAGACCAGGCGACCATGGAATCGCTGCGCGAGACCACGCATGCCGTGCTCGCGCAGCTCACGCCGAGGGAAGCCAAGGTGCTGCGCATGCGCTTCGGCATCGACCTGAACACCGACCACACGCTGGAAGAAGTCGGCAAGCAGTTCGACGTCACGCGTGAACGGATCCGCCAGATCGAGGCGAAGGCGCTGCGCAAGCTGCGCCACCCGAGCAGGAGCGAGCAGCTGCGCAGCTTCCTCGTGGAGGACTGA
PROTEIN sequence
Length: 715
MTARKHKTTPAANRKHASVDRKPATRTAPKKSAATTAVRKAPPQKVKAKPTASAGAPTPPVKPAPARGRVAELKSPPTTSPQAVDTRKPVGQERRGIAMPEDRQSQLKLLIARGKEQGYLTYSQVNDHLPSEIVDPEQIEEIVNTINDMGIPVYEKAPDAESLLATEPSGPTDEEAIEEAAAALAALDAELGRTTDPVRMYMREMGTVELLTREGEIRIAKRIEEGLDAVRGALSLYPSTLECLLKAYEPVKGGQARLVDIIVGFIDPNAPDVIAQPQNPTKMELTEAEEEGDDEEEGDDDSSSDEAVDTGPDPEEAARRFASIAKLHTQTLTAIARHGAGDPKTLKLRRKLGGEFMELKLSPRMFDALILNLRSHISEVRQLEKEIMVLAVRDAGMPRKDFITSFPKNETSSRWLARHVKAGKKYSAGLARLKDEIELRQHRLELLEQQFHLSVHDIKEINREVSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPDELAVRMEMPEDKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTSVTSPIDQATMESLRETTHAVLAQLTPREAKVLRMRFGIDLNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLVED*