ggKbase home page

anamox1_curated_scaffold_963_16

Organism: anamox1_Proteobacteria_67_8_curated

near complete RP 50 / 55 MC: 1 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 20668..21507

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 275.0
  • Bit_score: 299
  • Evalue 4.00e-78
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 272.0
  • Bit_score: 297
  • Evalue 4.00e-78
shikimate 5-dehydrogenase Tax=Methylococcus capsulatus RepID=UPI000311390C similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 272.0
  • Bit_score: 299
  • Evalue 2.20e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGAGCGGCGAACCCGACCAGTACGGGGTCATCGGACATCCCGTCAGCCACAGCTGGTCGCCGTTCATCCACGGACTGTTTGCGCGGCAGACGGGACAGTCGATGAGCTACCGGCTCTACGACGCACCGCCCGGGCGCTTCCGGTCCTGCGCGCTGGAGTTCTTCGCGGGCGGCGGACTCGGCCTGAACGTCACCGTGCCCCACAAGGCGGCCGCGGCCGAGCTTGCCAACGAGCTCACGCCACGCGCCGAGCGGGCCGGTGCCGTCAACACGCTCGCGCTCCAGGGGGATCACCGCCTGCTCGGCGACAATACCGACGGCGCGGGCCTCGTGCGCGACCTGCGCAGCAACCTCGGGATCGAGCTCATCGCCAGCCGGCTGCTCCTCCTCGGTGCTGGAGGTGCGGCGCGCGGCGTGCTCGCACCACTGCTCGCACTCGAGCCGGCGGAGATCGTGATCGCCAACCGCACGGCCGCCCGCGCACGCGAGCTCGCGCAGCGCTTCGCCTCGCTCGGACCGGTGACAGGTTGCGGCTTCGGCGACATCCCGGTCCGGCCCTTCGATCTGGTCATCAATGCCACGGCGTCGAGCCTGCAGGGCGGCACACCGGATGTGCCGCCGCGCATCCTCGGACGGGAGACGGTCTGCTACGACATGGCCTACGGCAGGGCCGAGACGCCCTTCGAGCTCTGGGCCCGTGAGCACGGGTGCATGCGTACGCACCAGGGCTGGGGGATGCTGGTGGAGCAGGCCGCCGAATCGTTCTATCTCTGGCGCGGCATGCGACCTGCCACGGCACCGGTGCTCGCGGCCCTGCGGTCCAGGGCCGCTCACAGCTGA
PROTEIN sequence
Length: 280
MSGEPDQYGVIGHPVSHSWSPFIHGLFARQTGQSMSYRLYDAPPGRFRSCALEFFAGGGLGLNVTVPHKAAAAELANELTPRAERAGAVNTLALQGDHRLLGDNTDGAGLVRDLRSNLGIELIASRLLLLGAGGAARGVLAPLLALEPAEIVIANRTAARARELAQRFASLGPVTGCGFGDIPVRPFDLVINATASSLQGGTPDVPPRILGRETVCYDMAYGRAETPFELWAREHGCMRTHQGWGMLVEQAAESFYLWRGMRPATAPVLAALRSRAAHS*