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anamox1_curated_scaffold_963

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_963_1
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..777
DNA (777bp) protein (259aa)
PAP2_like_6 family phosphatase Tax=Geobacter sulfurreducens RepID=D7ADV9_GEOSK
PAP2_like_6 family phosphatase
Phosphoesterase {ECO:0000313|EMBL:AJY69204.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
anamox1_curated_scaffold_963_2
unknown

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824..1639
DNA (816bp) protein (272aa)

This feature has no annotations

anamox1_curated_scaffold_963_3

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1736..3496
DNA (1761bp) protein (587aa)
Arginyl-tRNA synthetase {ECO:0000313|EMBL:EQD38424.1}; EC=6.1.1.19 {ECO:0000313|EMBL:EQD38424.1};; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginyl-tRNA synthetase (Fragment) Tax=mine drainage metagenome RepID=T1ABY0_9ZZZZ
anamox1_curated_scaffold_963_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3520..4095
DNA (576bp) protein (192aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036DFC10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL71361.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_963_5
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4108..5463)
DNA (1356bp) protein (452aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YDK2_THIV6
Two component, sigma54 specific,transcriptional regulator, Fis family {ECO:0000313|EMBL:CDI00932.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
anamox1_curated_scaffold_963_6
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5460..7682)
DNA (2223bp) protein (741aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI0003747B28
histidine kinase
anamox1_curated_scaffold_963_7
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7664..8257)
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3C7_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16834.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
anamox1_curated_scaffold_963_8
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8254..9618)
DNA (1365bp) protein (455aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
Sun protein Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RV65_ALLVD
sun protein
anamox1_curated_scaffold_963_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9615..10583)
DNA (969bp) protein (323aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein Tax=Dyella japonica RepID=UPI0002D4C200
methionyl-tRNA formyltransferase
anamox1_curated_scaffold_963_10
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10611..11153)
DNA (543bp) protein (181aa)
def-2; polypeptide deformylase (EC:3.5.1.88)
Peptide deformylase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q603G3_METCA
Tax=BJP_08E140C01_Xanthomonadales_64_42
anamox1_curated_scaffold_963_11
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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11358..12587
DNA (1230bp) protein (410aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI000364108B
Uncharacterized protein {ECO:0000313|EMBL:AKH21010.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
peptidoglycan-binding lysin domain-containing protein
anamox1_curated_scaffold_963_12
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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12678..13796
DNA (1119bp) protein (373aa)
DNA protecting protein DprA Tax=Thioflavicoccus mobilis 8321 RepID=L0GVQ6_9GAMM
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:AGA90046.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
anamox1_curated_scaffold_963_13
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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13840..16455
DNA (2616bp) protein (872aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0C4_9GAMM
anamox1_curated_scaffold_963_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16598..19708
DNA (3111bp) protein (1037aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Oscillochloris trichoides DG-6 RepID=E1ICD2_9CHLR
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RBG_16_Actinobacteria_68_12_curated
anamox1_curated_scaffold_963_15
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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19731..20591
DNA (861bp) protein (287aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
UPI0003CEC6FB related cluster Tax=unknown RepID=UPI0003CEC6FB
hypothetical protein
anamox1_curated_scaffold_963_16
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20668..21507
DNA (840bp) protein (280aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
shikimate 5-dehydrogenase Tax=Methylococcus capsulatus RepID=UPI000311390C
anamox1_curated_scaffold_963_17
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21498..22856)
DNA (1359bp) protein (453aa)
gor; glutathione-disulfide reductase (EC:1.8.1.7)
Probable glutathione-disulfide reductase {ECO:0000313|EMBL:CAL93276.1}; EC=1.8.1.7 {ECO:0000313|EMBL:CAL93276.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Probable glutathione-disulfide reductase Tax=Azoarcus sp. (strain BH72) RepID=A1K371_AZOSB
anamox1_curated_scaffold_963_18
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23014..25041
DNA (2028bp) protein (676aa)
Oligopeptidase A {ECO:0000313|EMBL:CDI03702.1}; EC=3.4.24.70 {ECO:0000313|EMBL:CDI03702.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
oligopeptidase A (EC:3.4.24.70)
Oligopeptidase A Tax=uncultured gamma proteobacterium RepID=H5SHV0_9GAMM
anamox1_curated_scaffold_963_19
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25078..25851
DNA (774bp) protein (258aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:CDH44597.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CDH44597.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
Exodeoxyribonuclease III Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZD5_HALHL
exodeoxyribonuclease III Xth
anamox1_curated_scaffold_963_20
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25967..26974
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2143 RepID=A0YE21_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
anamox1_curated_scaffold_963_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26949..27692)
DNA (744bp) protein (248aa)
Serine-type D-Ala-D-Ala carboxypeptidase Tax=Kingella denitrificans ATCC 33394 RepID=F0EXL4_9NEIS
putative carboxypeptidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
anamox1_curated_scaffold_963_22
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27780..30278
DNA (2499bp) protein (833aa)
Sensor diguanylate cyclase/phosphodiesterase, HAMP and PAS domain-containing Tax=Geobacter sulfurreducens RepID=D7AH91_GEOSK
sensor diguanylate cyclase/phosphodiesterase, HAMP and PAS domain-containing
Sensor diguanylate cyclase/phosphodiesterase, HAMP and PAS domain-containing {ECO:0000313|EMBL:AAR34273.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
anamox1_curated_scaffold_963_23
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30349..32256
DNA (1908bp) protein (636aa)
ABC transporter related protein Tax=Marichromatium purpuratum 984 RepID=F9TYL1_MARPU
glutathione ABC transporter ATP-binding protein
Glutathione ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF02499.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
anamox1_curated_scaffold_963_24
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32267..33835
DNA (1569bp) protein (523aa)
Uncharacterized protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPN1_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL72198.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox1_curated_scaffold_963_25
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33858..34505)
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Caenispirillum salinarum AK4 RepID=K9GTL0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV28094.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
putative lipoprotein
anamox1_curated_scaffold_963_26
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34502..35437)
DNA (936bp) protein (312aa)
hypothetical protein Tax=Fodinicurvata sediminis RepID=UPI0003B56322
Uncharacterized protein {ECO:0000313|EMBL:KGM33590.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
anamox1_curated_scaffold_963_27
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35427..36209)
DNA (783bp) protein (261aa)
iron ABC transporter ATP-binding protein Tax=Pseudomonas pelagia RepID=UPI0003A696C8
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP65697.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ABC transporter-like protein
anamox1_curated_scaffold_963_28
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36209..37336)
DNA (1128bp) protein (376aa)
ABC transporter permease Tax=Fodinicurvata sediminis RepID=UPI0003B5997B
ABC transporter permease {ECO:0000313|EMBL:KFI29292.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
putative ABC transporter, permease protein
anamox1_curated_scaffold_963_29
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37376..37618)
DNA (243bp) protein (81aa)
Putative uncharacterized protein Tax=Rhodobacterales bacterium Y4I RepID=B6B9H1_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ46253.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
hypothetical protein
anamox1_curated_scaffold_963_30
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37669..39807)
DNA (2139bp) protein (713aa)
TonB-dependent receptor Tax=Novosphingobium sp. PP1Y RepID=F6IDD3_9SPHN
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:CCA90308.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Displaying items 1-30 of 37 in total

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