ggKbase home page

anamox1_curated_scaffold_6459

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_6459_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..349
DNA (348bp) protein (116aa)
Tetratricopeptide TPR_2 repeat-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGM0_NIAKG
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEV98462.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_6459_2
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(361..753)
DNA (393bp) protein (131aa)
hypothetical protein Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000371BC73
hiran domain superfamily
Hiran domain superfamily {ECO:0000313|EMBL:AEF83520.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
anamox1_curated_scaffold_6459_3
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(725..1537)
DNA (813bp) protein (271aa)
hypothetical protein Tax=[Clostridium] glycolicum RepID=UPI00037F67BE
DnaJ-class molecular chaperone with C-terminal Zn finger domain
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:AGK98698.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
anamox1_curated_scaffold_6459_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(1643..3433)
DNA (1791bp) protein (597aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Arginine--tRNA ligase Tax=Niabella soli DSM 19437 RepID=H1NJI0_9SPHI
arginyl-tRNA synthetase
anamox1_curated_scaffold_6459_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3502..4068
DNA (567bp) protein (189aa)
GtrA family protein Tax=Niabella soli DSM 19437 RepID=H1NJH9_9SPHI
phenylalanine 4-monooxygenase
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:AHF14227.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_6459_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4051..5505)
DNA (1455bp) protein (485aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00035F9C3D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17182.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_6459_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5819..7744
DNA (1926bp) protein (642aa)
molecular chaperone DnaK Tax=Niabella aurantiaca RepID=UPI0003678642
dnaK; molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_6459_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8842..9141)
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Parabacteroides merdae CL03T12C32 RepID=K6A706_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11463.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
RNP-1 like RNA-binding protein
anamox1_curated_scaffold_6459_9
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

9405..12056
DNA (2652bp) protein (884aa)
hypothetical protein Tax=Lewinella persica RepID=UPI00036CD9EA
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
anamox1_curated_scaffold_6459_10
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12104..12520
DNA (417bp) protein (139aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003722D38
Uncharacterized protein {ECO:0000313|EMBL:KGO86650.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
zinc-binding CMP/dCMP deaminase
anamox1_curated_scaffold_6459_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13103..13519)
DNA (417bp) protein (139aa)
Glycosyl hydrolase, family 9 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAY2_NIAKG
glycosyl transferase family protein
Glycosyl hydrolase, family 9 {ECO:0000313|EMBL:AEW00325.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 11 items

View Taxonomy