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LAC_NA06_curatedSub20_scaffold_140

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_NA06_curatedSub20_scaffold_140_1
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
3-hydroxyacyl-CoA dehydrogenase
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_140_2
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(293..1561)
DNA (1269bp) protein (423aa)
Acyl-CoA dehydrogenase domain protein bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
acyl-CoA dehydrogenase domain-containing protein
Tax=RBG_16_Chloroflexi_51_16_curated
LAC_NA06_curatedSub20_scaffold_140_3
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(1634..2731)
DNA (1098bp) protein (366aa)
Acyl-CoA dehydrogenase domain protein bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
acyl-CoA dehydrogenase
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_140_4
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(2746..3309)
DNA (564bp) protein (188aa)
Transcriptional regulator, TetR family bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
TetR family transcriptional regulator
Tax=RBG_16_Chloroflexi_56_8_curated
LAC_NA06_curatedSub20_scaffold_140_5
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

3429..5867
DNA (2439bp) protein (813aa)
1A family penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family Tax=Roseiflexus sp. (strain RS-1) RepID=A5UX86_ROSS1
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_140_6
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5881..6411)
DNA (531bp) protein (177aa)
Cytochrome B561 Tax=Reinekea blandensis MED297 RepID=A4BKA2_9GAMM
cytochrome b561
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_140_7
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(6534..7622)
DNA (1089bp) protein (363aa)
Putative uncharacterized protein Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUY1_9EURY
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_140_8
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7681..7992)
DNA (312bp) protein (104aa)
Uncharacterized protein bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_140_9
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(8073..8789)
DNA (717bp) protein (239aa)
Cyclic nucleotide-binding protein Tax=Oscillochloris trichoides DG-6 RepID=E1IE62_9CHLR
putative Crp family transcriptional regulator
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_140_10
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

8918..10867
DNA (1950bp) protein (650aa)
GAF sensor signal transduction histidine kinase bin=bin9_gal15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
LAC_NA06_curatedSub20_scaffold_140_11
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

10836..11486
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6S1_SPHTD
two component transcriptional regulator, LuxR family
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
LAC_NA06_curatedSub20_scaffold_140_12
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

11697..12275
DNA (579bp) protein (193aa)
Putative monoheme cytochrome c Tax=Nitrolancetus hollandicus Lb RepID=I4ELU4_9CHLR
narC-2; respiratory nitrate reductase, cytochrome c
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_140_13
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

12272..15904
DNA (3633bp) protein (1211aa)
nitrate reductase subunit alpha (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4] bin=bin5_DeltaP species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
nitrate reductase subunit alpha (EC:1.7.99.4)
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_140_14
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

15995..17485
DNA (1491bp) protein (497aa)
Nitrate reductase 1, beta subunit bin=GWC2_Proteo_65_14_Ab886 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
narH-2; nitrate reductase Z subunit beta
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_140_15
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

17488..18033
DNA (546bp) protein (182aa)
Nitrate reductase 1, delta subunit bin=GWC2_Proteo_65_14_Ab886 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
nitrate reductase molybdenum cofactor assembly chaperone
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_140_16
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

18026..18706
DNA (681bp) protein (227aa)
Nitrate reductase gamma subunit Tax=Nitrobacter sp. Nb-311A RepID=A3X1D1_9BRAD
nitrate reductase subunit gamma
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_140_17
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18717..19772
DNA (1056bp) protein (352aa)
Putative C4-dicarboxylate transporter/malic acid transport protein Tax=Nitrolancetus hollandicus Lb RepID=I4ELU8_9CHLR
Putative C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:CCF85661.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
C4-dicarboxylate transporter
LAC_NA06_curatedSub20_scaffold_140_18
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(19830..23264)
DNA (3435bp) protein (1145aa)
Diguanylate cyclase bin=GWC2_Nitrospirae-rel_56_14 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=GWC2_Nitrospirae_56_14_curated
LAC_NA06_curatedSub20_scaffold_140_19
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(23461..23862)
DNA (402bp) protein (134aa)
Uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_140_20
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(23863..24261)
DNA (399bp) protein (133aa)
Hypothetical conserved protein Tax=uncultured Chloroflexi bacterium RepID=H5S9C2_9CHLR
hypothetical protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_140_21
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(24264..25346)
DNA (1083bp) protein (361aa)
Hypothetical conserved protein Tax=uncultured Chloroflexi bacterium RepID=H5S9C1_9CHLR
hypothetical protein
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_140_22
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

25545..25928
DNA (384bp) protein (128aa)
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_140_23
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

25932..26798
DNA (867bp) protein (289aa)
Cytochrome c, class I Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUK3_NITWN
cytochrome c, class I
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_140_24
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26921..30577
DNA (3657bp) protein (1219aa)
nitrate reductase subunit alpha (EC:1.97.1.9)
Nitrate reductase, alpha subunit Tax=Nitrococcus mobilis Nb-231 RepID=A4BM17_9GAMM
Nitrate reductase, alpha subunit {ECO:0000313|EMBL:EAR23355.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
LAC_NA06_curatedSub20_scaffold_140_25
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

30653..32170
DNA (1518bp) protein (506aa)
nitrate reductase subunit beta (EC:1.7.99.4)
Nitrite oxidoreductase, beta subunit Tax=Nitrolancetus hollandicus Lb RepID=I4ELU5_9CHLR
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_140_26
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

32170..32799
DNA (630bp) protein (210aa)
Nitrite oxidoreductase, delta subunit {ECO:0000313|EMBL:CCF85659.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CCF85659.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Nitrite oxidoreductase, delta subunit Tax=Nitrolancetus hollandicus Lb RepID=I4ELU6_9CHLR
nitrate reductase subunit delta
LAC_NA06_curatedSub20_scaffold_140_27
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

32895..33566
DNA (672bp) protein (224aa)
narI; nitrate reductase subunit gamma (EC:1.7.99.4)
Nitrate reductase 1, gamma subunit Tax=uncultured prokaryote RepID=H5SEM4_9ZZZZ
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_140_28
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

33649..34272
DNA (624bp) protein (208aa)
Formylmethanofuran dehydrogenase subunit E region Tax=Chloroflexus RepID=A9WAQ4_CHLAA
formylmethanofuran dehydrogenase subunit E
Tax=CG_Anaero_02
LAC_NA06_curatedSub20_scaffold_140_29
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

34515..34745
DNA (231bp) protein (77aa)
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_140_30
unknown

Not on your lists

34918..37950
DNA (3033bp) protein (1011aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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