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LAC_NA06_curatedSub20_scaffold_184

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_NA06_curatedSub20_scaffold_184_1
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1..612)
DNA (612bp) protein (204aa)
Heme exporter protein CcmB bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
ccmB; heme exporter protein CcmB
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
LAC_NA06_curatedSub20_scaffold_184_2
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(638..1336)
DNA (699bp) protein (233aa)
Heme exporter protein CcmA bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
ccmA; heme exporter protein CcmA
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
LAC_NA06_curatedSub20_scaffold_184_3
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(1359..3194)
DNA (1836bp) protein (612aa)
Cytochrome c family protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
cytochrome c family protein
Tax=RBG_16_Chloroflexi_58_14_curated
LAC_NA06_curatedSub20_scaffold_184_4
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3238..3756)
DNA (519bp) protein (173aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
LAC_NA06_curatedSub20_scaffold_184_5
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3765..4340)
DNA (576bp) protein (192aa)
Cytochrome c biogenesis protein bin=GWC2_Chloroflexi_49_37 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
resA; cytochrome c biogenesis protein
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_184_6
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4401..4892)
DNA (492bp) protein (164aa)
Cytochrome c-type biogenesis protein CcmH bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
ccmH; cytochrome c-type biogenesis protein CcmH
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_184_7
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(4906..6969)
DNA (2064bp) protein (688aa)
Cytochrome c-type biogenesis protein CcmF bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
ccmF; cytochrome c-type biogenesis protein CcmF
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_184_8
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(7179..7664)
DNA (486bp) protein (162aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
LAC_NA06_curatedSub20_scaffold_184_9
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7785..9809)
DNA (2025bp) protein (675aa)
transmembrane_regions 27..49 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
LAC_NA06_curatedSub20_scaffold_184_10
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

10020..11171
DNA (1152bp) protein (384aa)
Cytochrome c family protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
cytochrome c family protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_184_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

11171..12367
DNA (1197bp) protein (399aa)
Cytochrome c family protein bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
cytochrome c family protein
Tax=RBG_16_Chloroflexi_63_12_curated
LAC_NA06_curatedSub20_scaffold_184_12
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(12430..13494)
DNA (1065bp) protein (355aa)
WD40-like Beta Propeller Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
hypothetical protein
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_184_13
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(13515..14120)
DNA (606bp) protein (202aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N557_ANATU
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
LAC_NA06_curatedSub20_scaffold_184_14
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

14252..15832
DNA (1581bp) protein (527aa)
Beta-mannanase Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A7D0_DEIPD
beta-mannanase
Tax=RBG_16_Chloroflexi_56_8_curated
LAC_NA06_curatedSub20_scaffold_184_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15848..16963
DNA (1116bp) protein (372aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI00037E498F
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
LAC_NA06_curatedSub20_scaffold_184_16
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

17017..17634
DNA (618bp) protein (206aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_Chloroflexi_49_37_curated
LAC_NA06_curatedSub20_scaffold_184_17
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(17547..17720)
DNA (174bp) protein (58aa)
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_184_18
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

17772..18281
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFA3_9CHLR bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_184_19
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

18461..19054
DNA (594bp) protein (198aa)
Hypothetical membrane protein bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_184_20
unknown

Not on your lists

19051..19194
DNA (144bp) protein (48aa)

This feature has no annotations

LAC_NA06_curatedSub20_scaffold_184_21
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

19511..20017
DNA (507bp) protein (169aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=CG_Anaero_03
LAC_NA06_curatedSub20_scaffold_184_22
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

20058..20987
DNA (930bp) protein (310aa)
pseudouridine synthase (EC:4.2.1.70)
Pseudouridine synthase Tax=uncultured Chloroflexi bacterium RepID=H5S8P3_9CHLR
Tax=BJP_IG2157_Anaerolineales_55_23
LAC_NA06_curatedSub20_scaffold_184_23
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(21037..21702)
DNA (666bp) protein (222aa)
Tax=CG_Anaero_01
LAC_NA06_curatedSub20_scaffold_184_24
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

21794..22690
DNA (897bp) protein (299aa)
Putative diguanylate cyclase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B573_HERA2
diguanylate cyclase
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
LAC_NA06_curatedSub20_scaffold_184_25
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

22712..23374
DNA (663bp) protein (221aa)
UDP-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNM1_ROSCS
Tax=CG_Anaero_03
LAC_NA06_curatedSub20_scaffold_184_26
R_OP11_Roizmanbacteria_35_13, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(23431..24411)
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Acanthamoeba castellanii str. Neff RepID=L8HC86_ACACA
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_35_13_curated
LAC_NA06_curatedSub20_scaffold_184_27
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(24420..25760)
DNA (1341bp) protein (447aa)
Asparagine--tRNA ligase bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
asnS; asparaginyl-tRNA synthetase
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_184_28
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(25875..27638)
DNA (1764bp) protein (588aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4D5_ANATU
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_184_29
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(27834..28274)
DNA (441bp) protein (147aa)
Hypothetical membrane protein bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
Displaying 29 items

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