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LAC_NA06_curatedSub20_scaffold_376

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_NA06_curatedSub20_scaffold_376_1
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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2..265
DNA (264bp) protein (88aa)
NADH-quinone oxidoreductase subunit K bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
nuoK; NADH-quinone oxidoreductase chain K
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_376_2
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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272..2461
DNA (2190bp) protein (730aa)
NADH dehydrogenase I subunit L bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
putative NADH-quinone oxidoreductase subunit L
Tax=RBG_16_Chloroflexi_52_11_curated
LAC_NA06_curatedSub20_scaffold_376_3
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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2472..4001
DNA (1530bp) protein (510aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH dehydrogenase I subunit M Tax=uncultured Chloroflexi bacterium RepID=H5SA73_9CHLR
Tax=CG_Anaero_04
LAC_NA06_curatedSub20_scaffold_376_4
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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4081..5595
DNA (1515bp) protein (505aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH dehydrogenase I subunit M Tax=uncultured Chloroflexi bacterium RepID=H5SA74_9CHLR
Tax=RBG_16_Chloroflexi_52_11_curated
LAC_NA06_curatedSub20_scaffold_376_5
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

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5596..7038
DNA (1443bp) protein (481aa)
NADH-quinone oxidoreductase subunit N bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
putative NADH-quinone oxidoreductase subunit N
Tax=RBG_16_Chloroflexi_51_16_curated
LAC_NA06_curatedSub20_scaffold_376_6
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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7106..7393
DNA (288bp) protein (96aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
LAC_NA06_curatedSub20_scaffold_376_7
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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7386..8357
DNA (972bp) protein (324aa)
atpB; ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=CG_Anaero_03
LAC_NA06_curatedSub20_scaffold_376_8
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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8432..8683
DNA (252bp) protein (84aa)
atpE; ATP synthase subunit C (EC:3.6.3.14)
ATP synthase C chain bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=CG_Anaero_03
LAC_NA06_curatedSub20_scaffold_376_9
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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8699..9433
DNA (735bp) protein (245aa)
atpF_atpH; ATP synthase subunit B/ATP synthase delta chain (EC:3.6.3.14)
ATP synthase subunit b bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
LAC_NA06_curatedSub20_scaffold_376_10
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

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9562..11154
DNA (1593bp) protein (531aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Chloroflexi_51_16_curated
LAC_NA06_curatedSub20_scaffold_376_11
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

11267..11845
DNA (579bp) protein (193aa)
Hypothetical conserved protein bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
LAC_NA06_curatedSub20_scaffold_376_12
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

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comp(11849..12787)
DNA (939bp) protein (313aa)
Putative esterase Tax=uncultured bacterium A1Q1_fos_1880 RepID=L7VVZ9_9BACT
alpha/beta hydrolase domain-containing protein
Tax=CG_Anaero_01
LAC_NA06_curatedSub20_scaffold_376_13
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(12948..14243)
DNA (1296bp) protein (432aa)
Hypothetical conserved protein Tax=uncultured Chloroflexi bacterium RepID=H5SHM0_9CHLR
major facilitator superfamily transporter
Tax=RBG_16_Chloroflexi_51_16_curated
LAC_NA06_curatedSub20_scaffold_376_14
unknown

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comp(14301..14405)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 14 items

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