ggKbase home page

anamox3_curatedSub10_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 235 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curatedSub10_scaffold_6_1
unknown

Not on your lists

2..70
DNA (69bp) protein (23aa)

This feature has no annotations

anamox3_curatedSub10_scaffold_6_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

752..2905
DNA (2154bp) protein (718aa)
Fibronectin type III domain protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG98_IGNAJ
fibronectin type III domain-containing protein
Tax=RBG_16_Ignavibacteria_34_14_curated
anamox3_curatedSub10_scaffold_6_3
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3979..5163
DNA (1185bp) protein (395aa)
Fibronectin type III domain protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKB5_IGNAJ
fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:AFH49422.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox3_curatedSub10_scaffold_6_4
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5503..6279
DNA (777bp) protein (259aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Ignavi_02
anamox3_curatedSub10_scaffold_6_5
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6331..7257
DNA (927bp) protein (309aa)
ABC transporter, ATPase component Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L902_ZOBGA
ABC transporter ATPase
ABC transporter, ATPase component {ECO:0000313|EMBL:CAZ94290.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
anamox3_curatedSub10_scaffold_6_6
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7260..7985
DNA (726bp) protein (242aa)
ABC-2 type exporter permease bin=GWA2_Bacteroidetes_42_15 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
ABC transporter permease
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox3_curatedSub10_scaffold_6_7
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7993..9651
DNA (1659bp) protein (553aa)
Conserved hypothetical membrane protein bin=GWF2_Bacteroidetes_42_66 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
anamox3_curatedSub10_scaffold_6_8
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9651..10589
DNA (939bp) protein (313aa)
Tax=RBG_13_Ignavibacteria_36_8_curated
anamox3_curatedSub10_scaffold_6_9
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10671..11408
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM75_IGNAJ
hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox3_curatedSub10_scaffold_6_10
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11583..12167
DNA (585bp) protein (195aa)
Dihydroneopterin aldolase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
folB; dihydroneopterin aldolase
Tax=RBG_16_Ignavibacteria_35_7_curated
anamox3_curatedSub10_scaffold_6_11
Streptococcus sobrinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12170..12700
DNA (531bp) protein (177aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Tax=Streptococcus sobrinus RepID=UPI0002D85426
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:ERJ74349.1}; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sobrinus W1703.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
anamox3_curatedSub10_scaffold_6_12
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12690..13343
DNA (654bp) protein (218aa)
Deoxynucleoside kinase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM71_IGNAJ
dgk; deoxynucleoside kinase
Deoxynucleoside kinase {ECO:0000313|EMBL:AFH50078.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox3_curatedSub10_scaffold_6_13
unknown

Not on your lists

13340..13564
DNA (225bp) protein (75aa)

This feature has no annotations

anamox3_curatedSub10_scaffold_6_14
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13561..14640
DNA (1080bp) protein (360aa)
ADP-heptose:LPS heptosyltransferase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
opsX; ADP-heptose--LPS heptosyltransferase
Tax=CG_Ignavi_02
anamox3_curatedSub10_scaffold_6_15
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14700..15584
DNA (885bp) protein (295aa)
Exopolyphosphatase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM68_IGNAJ
ppx; exopolyphosphatase
Tax=RBG_16_Ignavibacteria_34_14_curated
anamox3_curatedSub10_scaffold_6_16
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15716..16105
DNA (390bp) protein (130aa)
hypothetical protein Tax=Anaerophaga thermohalophila RepID=UPI000237C083
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
anamox3_curatedSub10_scaffold_6_17
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16663..19800
DNA (3138bp) protein (1046aa)
rmg:Rhom172_0311 TonB-dependent outer membrane receptor bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
anamox3_curatedSub10_scaffold_6_18
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(20543..21085)
DNA (543bp) protein (181aa)
Thioredoxin-like protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AP94_IGNAJ
thioredoxin-like protein
Thioredoxin-like protein {ECO:0000313|EMBL:AFH50801.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox3_curatedSub10_scaffold_6_19
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21208..22179
DNA (972bp) protein (324aa)
L-asparaginase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
L-asparaginase
Tax=RBG_16_Ignavibacteria_35_7_curated
anamox3_curatedSub10_scaffold_6_20
RIFOXYD2_FULL_Sulfurimonas_34_21_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22272..24707)
DNA (2436bp) protein (812aa)
Chromosome segregation protein Tax=Arcobacter butzleri ED-1 RepID=G2HPI6_9PROT
chromosome segregation protein
Tax=RIFOXYD2_FULL_Sulfurimonas_34_21_curated
anamox3_curatedSub10_scaffold_6_21
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24697..25845)
DNA (1149bp) protein (383aa)
Metallophosphoesterase Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V613_ARCNC
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADG93180.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 /; NCTC 12251 / CI) (Campylobacter nitrofigilis).;"
anamox3_curatedSub10_scaffold_6_22
MPI_Marinimicrobia_46_47, SAR406, SAR406, Marinimicrobia (Marine group A), Bacteria

Not on your lists

26258..28963
DNA (2706bp) protein (902aa)
Alpha-amylase/alpha-mannosidase bin=GWF2_Lentisphaerae_57_35 species=Thiorhodovibrio sp. 970 genus=Thiorhodovibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
glycosyl hydrolase family 57
Tax=MPI_Marinimicrobia_46_47
anamox3_curatedSub10_scaffold_6_23
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

29326..30300
DNA (975bp) protein (325aa)
hypothetical protein Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00037E9AC0
oxidoreductase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
anamox3_curatedSub10_scaffold_6_24
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

30297..30884
DNA (588bp) protein (196aa)
UDP-D-GlcNAc3NA acetyltransferase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
wbpD; UDP-D-GlcNAc3NA acetyltransferase
Tax=BJP_IG2102_Ignavibacteriales_35_8
anamox3_curatedSub10_scaffold_6_25
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

30885..32051
DNA (1167bp) protein (389aa)
Glutamine--scyllo-inositol transaminase bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
pyridoxal phosphate-dependent enzyme
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
anamox3_curatedSub10_scaffold_6_26
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32285..32533)
DNA (249bp) protein (83aa)
hypothetical protein Tax=Flavobacterium sp. WG21 RepID=UPI0003495EB9
Contig_31, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ19483.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
endonuclease containing a URI domain
anamox3_curatedSub10_scaffold_6_trna_4
unknown

Not on your lists

comp(32588..32661)
DNA (74bp)
transferRNA Asp
anamox3_curatedSub10_scaffold_6_27
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

33121..36144
DNA (3024bp) protein (1008aa)
ial:IALB_0237 Signal transduction histidine kinase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
anamox3_curatedSub10_scaffold_6_28
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(36339..37895)
DNA (1557bp) protein (519aa)
Citrate lyase subunit alpha bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
citF; Citrate lyase subunit alpha
Tax=CG_Ignavi_02
anamox3_curatedSub10_scaffold_6_29
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(37882..39216)
DNA (1335bp) protein (445aa)
Citrate lyase subunit beta bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
citE; Citrate lyase subunit beta
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
Displaying items 1-30 of 235 in total

View Taxonomy