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anamox4_curated_scaffold_616

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_616_1
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(3..527)
DNA (525bp) protein (175aa)
Transposase, IS4 family protein Tax=Plesiocystis pacifica SIR-1 RepID=A6GGZ9_9DELT
transposase IS1182 family protein
Tax=RBG_16_NC10_65_8_curated
anamox4_curated_scaffold_616_2
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(569..3661)
DNA (3093bp) protein (1031aa)
Type III restriction protein res subunit Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2C2_CELFA
type III restriction protein res subunit
Type III restriction protein res subunit {ECO:0000313|EMBL:AEE47542.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
anamox4_curated_scaffold_616_3
unknown

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4453..4800
DNA (348bp) protein (116aa)

This feature has no annotations

anamox4_curated_scaffold_616_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5222..6334)
DNA (1113bp) protein (371aa)
Rod shape-determining protein RodA Tax=Desulfococcus multivorans DSM 2059 RepID=S7TQX8_DESML
rod shape-determining protein RodA
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
anamox4_curated_scaffold_616_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6337..8253)
DNA (1917bp) protein (639aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 bin=GWC2_Deltaproteobacteria_42_51 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
anamox4_curated_scaffold_616_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8288..8830)
DNA (543bp) protein (181aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
anamox4_curated_scaffold_616_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8827..9771)
DNA (945bp) protein (315aa)
Cell shape-determining protein MreC Tax=delta proteobacterium MLMS-1 RepID=Q1NLI6_9DELT
rod shape-determining protein MreC
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
anamox4_curated_scaffold_616_8
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(9793..10830)
DNA (1038bp) protein (346aa)
Rod shape-determining protein MreB bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mreB; rod shape-determining protein MreB
Tax=RBG_16_Acidobacteria_68_9_curated
anamox4_curated_scaffold_616_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11003..12928
DNA (1926bp) protein (642aa)
Peptidylprolyl cis-trans isomerase, putative Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A5Q7_PELCD
peptidylprolyl cis-trans isomerase
Tax=GWD2_Deltaproteobacteria_55_8_curated
anamox4_curated_scaffold_616_10
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12972..13790
DNA (819bp) protein (273aa)
Esterase/lipase Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P6Q3_STRVO
esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:AEM86573.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
anamox4_curated_scaffold_616_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..15175
DNA (1353bp) protein (451aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6E4_ANADF
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
anamox4_curated_scaffold_616_12
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

15172..15891
DNA (720bp) protein (240aa)
bioD; dethiobiotin synthetase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD Tax=Nitrolancetus hollandicus Lb RepID=I4EH99_9CHLR
Tax=RBG_16_Acidobacteria_68_9_curated
anamox4_curated_scaffold_616_13
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15958..17031)
DNA (1074bp) protein (358aa)
O-methyltransferase, putative Tax=Plesiocystis pacifica SIR-1 RepID=A6G6X9_9DELT
O-methyltransferase, putative {ECO:0000313|EMBL:EDM78432.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
SAM-dependent methyltransferase
anamox4_curated_scaffold_616_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17114..18064)
DNA (951bp) protein (317aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase bin=GWC2_Deltaproteobacteria_42_51 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
anamox4_curated_scaffold_616_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(18064..19386)
DNA (1323bp) protein (441aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
anamox4_curated_scaffold_616_16
unknown

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comp(19419..20057)
DNA (639bp) protein (213aa)

This feature has no annotations

anamox4_curated_scaffold_616_17
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20205..22658)
DNA (2454bp) protein (818aa)
ATP-dependent DNA helicase RecG Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74DJ0_GEOSL
recG; ATP-dependent DNA helicase RecG
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
anamox4_curated_scaffold_616_18
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22869..24575
DNA (1707bp) protein (569aa)
Uncharacterized protein Tax=Mycobacterium kansasii ATCC 12478 RepID=U5X2Q1_MYCKA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ54481.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii ATCC 12478.;"
anamox4_curated_scaffold_616_19

Not on your lists

24799..26352
DNA (1554bp) protein (518aa)
Type I restriction-modification system, M subunit (Fragment) Tax=mine drainage metagenome RepID=T0ZUX4_9ZZZZ
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EQD33705.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
N-6 DNA methylase
anamox4_curated_scaffold_616_20

Not on your lists

26412..27524
DNA (1113bp) protein (371aa)
Restriction modification system DNA specificity subunit Tax=mine drainage metagenome RepID=T0YGL5_9ZZZZ
Restriction modification system DNA specificity subunit {ECO:0000313|EMBL:EQD30982.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
restriction modification system DNA specificity subunit
anamox4_curated_scaffold_616_21
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27537..27941
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82T31_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD86011.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox4_curated_scaffold_616_22
unknown

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27952..28062
DNA (111bp) protein (37aa)

This feature has no annotations

anamox4_curated_scaffold_616_23
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(28093..28557)
DNA (465bp) protein (155aa)
Possible transposase (Mutator type) Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVE5_RHOSR
transposase (mutator type)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Displaying 23 items

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