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anamox4_curated_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 898 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_4_1
unknown

Not on your lists

306..1373
DNA (1068bp) protein (356aa)

This feature has no annotations

anamox4_curated_scaffold_4_2
unknown

Not on your lists

1383..2570
DNA (1188bp) protein (396aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00035D8625
anamox4_curated_scaffold_4_3
unknown

Not on your lists

2587..3291
DNA (705bp) protein (235aa)

This feature has no annotations

anamox4_curated_scaffold_4_4
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3677..5086)
DNA (1410bp) protein (470aa)
NAD(P) transhydrogenase subunit beta bin=GWC2_Ignavibacteria_56_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
NAD(P) transhydrogenase subunit beta
Tax=RBG_13_Deltaproteobacteria_65_10_curated
anamox4_curated_scaffold_4_5
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5083..5484)
DNA (402bp) protein (134aa)
Nicotinamide nucleotide transhydrogenase, subunit alpha bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
nicotinamide nucleotide transhydrogenase subunit alpha
Tax=RBG_13_Deltaproteobacteria_65_10_curated
anamox4_curated_scaffold_4_6
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5484..6629)
DNA (1146bp) protein (382aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD/NADP transhydrogenase subunit alpha bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RBG_13_Deltaproteobacteria_65_10_curated
anamox4_curated_scaffold_4_7
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6778..7614)
DNA (837bp) protein (279aa)
putative methyltransferase (EC:2.1.1.-)
Putative methyltransferase {ECO:0000313|EMBL:BAN01668.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAN01668.1};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Putative methyltransferase Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZYG0_9ACTN
anamox4_curated_scaffold_4_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7624..8922
DNA (1299bp) protein (433aa)
Putative Oxidoreductase with FAD/NAD(P)-binding domain Tax=Candidatus Nitrospira defluvii RepID=D8PJ57_9BACT
putative oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
anamox4_curated_scaffold_4_9
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8926..10089
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Rhodococcus opacus M213 RepID=K8XR08_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:EKT83271.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
putative hydrolase
anamox4_curated_scaffold_4_10
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10393..11481
DNA (1089bp) protein (363aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8V1_GEOUR
ErfK/YbiS/YcfS/YnhG family protein
Tax=RBG_13_Deltaproteobacteria_43_22_curated
anamox4_curated_scaffold_4_11
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11493..12725)
DNA (1233bp) protein (411aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
DNA polymerase IV Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULE4_ANASK
anamox4_curated_scaffold_4_12
R_WOR_2_50_17, WOR-2, Bacteria

Not on your lists

comp(12722..14083)
DNA (1362bp) protein (454aa)
Amino acid carrier protein bin=GWA2_OP3_53_43 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
amino acid carrier protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
anamox4_curated_scaffold_4_13
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(14175..14966)
DNA (792bp) protein (264aa)
short-chain dehydrogenase Tax=Deinococcus sp. 2009 RepID=UPI0003B410A8
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AIZ44728.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
anamox4_curated_scaffold_4_14
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(14995..15894)
DNA (900bp) protein (300aa)
Alpha/beta hydrolase fold Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUT6_PARL1
alpha/beta hydrolase fold protein
Tax=RBG_16_Actinobacteria_67_15_curated
anamox4_curated_scaffold_4_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15996..16343
DNA (348bp) protein (116aa)
phhB; 4a-hydroxytetrahydrobiopterin dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase bin=GWB2_Pelobacter_53_15 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
anamox4_curated_scaffold_4_16
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16351..17292)
DNA (942bp) protein (314aa)
alpha/beta hydrolase Tax=Rhodococcus rhodochrous RepID=UPI00037A7714
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EON24759.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
alpha/beta hydrolase fold protein
anamox4_curated_scaffold_4_17

Not on your lists

comp(17323..18381)
DNA (1059bp) protein (353aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZZM2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KKN49166.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
anamox4_curated_scaffold_4_18
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18477..20303)
DNA (1827bp) protein (609aa)
AMP-dependent synthetase and ligase Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZTY9_DESOH
AMP-dependent synthetase and ligase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
anamox4_curated_scaffold_4_19
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20332..21189
DNA (858bp) protein (286aa)
Enoyl-CoA hydratase/isomerase Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQK6_PARL1
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABS62189.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
anamox4_curated_scaffold_4_20
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21186..22457
DNA (1272bp) protein (424aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9QP46_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX58343.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
bacterial extracellular solute-binding protein, family 3
anamox4_curated_scaffold_4_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22632..23279
DNA (648bp) protein (216aa)
carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Carbonic anhydrase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY1_GEMAT
anamox4_curated_scaffold_4_22
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23312..24181)
DNA (870bp) protein (290aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_66_18 species=Photobacterium sp. AK15 genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=GWC2_Elusimicrobia_65_9_curated
anamox4_curated_scaffold_4_23
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24273..25256)
DNA (984bp) protein (328aa)
hypothetical protein Tax=Loktanella hongkongensis RepID=UPI00036DC869
Uncharacterized protein {ECO:0000313|EMBL:EXI67183.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
methyltransferase
anamox4_curated_scaffold_4_24
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25283..26296)
DNA (1014bp) protein (338aa)
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:ACY18297.1}; EC=1.5.99.11 {ECO:0000313|EMBL:ACY18297.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
5,10-methylenetetrahydromethanopterin reductase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIE1_HALO1
anamox4_curated_scaffold_4_25
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

26421..28175
DNA (1755bp) protein (585aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Phosphoenolpyruvate-protein phosphotransferase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXA3_OPITP
phosphoenolpyruvate-protein phosphotransferase
anamox4_curated_scaffold_4_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(28185..28682)
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFY2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
anamox4_curated_scaffold_4_27
RLO_PLX_64_10, Bacteria

Not on your lists

comp(28723..30111)
DNA (1389bp) protein (463aa)
squalene-associated FAD-dependent desaturase (EC:1.14.99.30)
Squalene-associated FAD-dependent desaturase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LL71_CHLTF
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anamox4_curated_scaffold_4_28
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(30108..31001)
DNA (894bp) protein (298aa)
crtB; phytoene synthase (EC:2.5.1.32)
Phytoene synthase Tax=Candidatus Nitrospira defluvii RepID=B3U4U9_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
anamox4_curated_scaffold_4_29
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(30998..31870)
DNA (873bp) protein (291aa)
Squalene synthase HpnC Tax=Chthonomonas calidirosea T49 RepID=S0EX58_9BACT
squalene synthase HpnC
Squalene synthase HpnC {ECO:0000313|EMBL:CCW36026.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
anamox4_curated_scaffold_4_30
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(31867..33072)
DNA (1206bp) protein (402aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Tax=RBG_16_Acidobacteria_68_9_curated
Displaying items 1-30 of 898 in total

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