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anamox2_curated_scaffold_2052

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_2052_1
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(2..1855)
DNA (1854bp) protein (618aa)
Type I site-specific deoxyribonuclease, HsdR family Tax=Geobacter sp. (strain M18) RepID=E8WTX8_GEOS8
deoxyribonuclease HsdR
Deoxyribonuclease HsdR {ECO:0000313|EMBL:AKC82451.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
anamox2_curated_scaffold_2052_2
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1833..2648)
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Rhodopirellula baltica SWK14 RepID=L7CJJ4_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:ELP33812.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SWK14.;"
anamox2_curated_scaffold_2052_3
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2645..3466)
DNA (822bp) protein (274aa)
hypothetical protein Tax=Novosphingobium nitrogenifigens RepID=UPI00036985D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAK70373.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
anamox2_curated_scaffold_2052_4
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3466..4779)
DNA (1314bp) protein (438aa)
hypothetical protein Tax=Vibrio splendidus RepID=UPI0002F606FF
Uncharacterized protein {ECO:0000313|EMBL:KJS09934.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
anamox2_curated_scaffold_2052_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4776..6071)
DNA (1296bp) protein (432aa)
Type I restriction-modification system, S subunit Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6N1_ACIC5
hsdS; type I restriction-modification system subunit S
Type I restriction-modification system, S subunit {ECO:0000313|EMBL:ACO31304.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
anamox2_curated_scaffold_2052_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6068..7753)
DNA (1686bp) protein (562aa)
N-6 DNA methylase Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JS22_9GAMM
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:AEM46530.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
anamox2_curated_scaffold_2052_7
unknown

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comp(7808..8473)
DNA (666bp) protein (222aa)

This feature has no annotations

anamox2_curated_scaffold_2052_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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8590..9411
DNA (822bp) protein (274aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:ABJ87892.1}; EC=2.3.1.117 {ECO:0000313|EMBL:ABJ87892.1};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BD55D
anamox2_curated_scaffold_2052_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

9421..9666
DNA (246bp) protein (82aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B40779
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE87290.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_2052_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

9676..10194
DNA (519bp) protein (173aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000309F4A5
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_2052_11
unknown

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comp(10195..10938)
DNA (744bp) protein (248aa)

This feature has no annotations

anamox2_curated_scaffold_2052_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(11271..12140)
DNA (870bp) protein (290aa)
Branched-chain amino acid aminotransferase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAW4_AMMDK
branched chain amino acid aminotransferase apoenzyme
Branched chain amino acid aminotransferase apoenzyme {ECO:0000313|EMBL:AIE88045.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_2052_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(12301..13269)
DNA (969bp) protein (323aa)
Oxidoreductase domain protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U067_9CHLR
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AIE85412.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_2052_14
unknown

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comp(13367..13945)
DNA (579bp) protein (193aa)

This feature has no annotations

anamox2_curated_scaffold_2052_15
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

14245..15213
DNA (969bp) protein (323aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Acetylornithine aminotransferase Tax=Chthonomonas calidirosea T49 RepID=S0EV18_9BACT
acetylornithine and succinylornithine aminotransferase
Displaying 15 items

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