ggKbase home page

anamox2_curated_scaffold_3042

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_3042_1
unknown

Not on your lists

2..70
DNA (69bp) protein (23aa)

This feature has no annotations

anamox2_curated_scaffold_3042_2
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

334..783
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Asticcacaulis sp. AC460 RepID=V4PLW3_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ88254.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
hypothetical protein
anamox2_curated_scaffold_3042_3
unknown

Not on your lists

comp(845..1738)
DNA (894bp) protein (298aa)

This feature has no annotations

anamox2_curated_scaffold_3042_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(1895..2365)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B3469F
ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_3042_5
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2365..2748)
DNA (384bp) protein (128aa)
30S ribosomal protein S12 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RS12_SYMTH
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
anamox2_curated_scaffold_3042_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

2896..3456
DNA (561bp) protein (187aa)
Transcriptional repressor NrdR Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=NRDR_THELT
Ribonucleotide reductase transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_3042_7
unknown

Not on your lists

3579..3722
DNA (144bp) protein (48aa)

This feature has no annotations

anamox2_curated_scaffold_3042_8
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

3784..5205
DNA (1422bp) protein (474aa)
RND family efflux transporter, MFP subunit Tax=Chthonomonas calidirosea T49 RepID=S0EXG6_9BACT
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:CCW34992.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
anamox2_curated_scaffold_3042_9

Not on your lists

5159..5905
DNA (747bp) protein (249aa)
ABC transporter, ATP-binding protein Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28456_ARCFU
Uncharacterized protein {ECO:0000313|EMBL:KKL77052.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC-type antimicrobial peptide transport system, ATPase component
anamox2_curated_scaffold_3042_10
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

5899..8310
DNA (2412bp) protein (804aa)
Uncharacterized protein Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I442_DESAP
hypothetical protein
Tax=CG_Arma_01
anamox2_curated_scaffold_3042_11
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8326..9570
DNA (1245bp) protein (415aa)
Low-affinity putrescine importer PlaP Tax=Cesiribacter andamanensis AMV16 RepID=M7MYG2_9BACT
Amino acid permease {ECO:0000313|EMBL:AHM62385.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
amino acid transporter
anamox2_curated_scaffold_3042_12
unknown

Not on your lists

9613..10659
DNA (1047bp) protein (349aa)

This feature has no annotations

anamox2_curated_scaffold_3042_13
unknown

Not on your lists

comp(10674..11129)
DNA (456bp) protein (152aa)

This feature has no annotations

anamox2_curated_scaffold_3042_14
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11223..14051
DNA (2829bp) protein (943aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00036A37E2
Sucrose-6-phosphate hydrolase
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox2_curated_scaffold_3042_15
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(14156..14446)
DNA (291bp) protein (97aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE87189.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein bin=CNBR_ACIDO species=Thioalkalivibrio sp. ALJ3 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
anamox2_curated_scaffold_3042_16
GWF2_OD1_41_16, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

15022..16194
DNA (1173bp) protein (391aa)
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:KKR97699.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_41_16.;"
ATP-dependent RNA helicase RhlE
ATP-dependent RNA helicase bin=GWA1_ZB2_49_26 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
anamox2_curated_scaffold_3042_17
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16306..17925
DNA (1620bp) protein (540aa)
Endonuclease/exonuclease/phosphatase family protein Tax=Rhodopirellula baltica WH47 RepID=F2AVC9_RHOBT
hypothetical protein
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EGF26475.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
anamox2_curated_scaffold_3042_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(17894..18868)
DNA (975bp) protein (325aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
Displaying 18 items

View Taxonomy