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anamox2_curated_scaffold_1808

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1808_trna_4
unknown

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comp(22..94)
DNA (73bp)
transferRNA Ala
anamox2_curated_scaffold_1808_trna_3
unknown

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comp(114..187)
DNA (74bp)
transferRNA Asp
anamox2_curated_scaffold_1808_trna_2
unknown

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comp(238..310)
DNA (73bp)
transferRNA Glu
anamox2_curated_scaffold_1808_trna_1
unknown

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comp(336..408)
DNA (73bp)
transferRNA Ala
anamox2_curated_scaffold_1808_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(475..1884)
DNA (1410bp) protein (470aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Glutamate--tRNA ligase Tax=Alicycliphilus denitrificans RepID=E8TTB8_ALIDB
glutamyl-tRNA synthetase
anamox2_curated_scaffold_1808_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1881..3095)
DNA (1215bp) protein (405aa)
o-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
O-succinylhomoserine sulfhydrylase Tax=Alicycliphilus denitrificans RepID=E8TTB7_ALIDB
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:GAO22594.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
anamox2_curated_scaffold_1808_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3233..4747)
DNA (1515bp) protein (505aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Amidophosphoribosyltransferase Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBI5_ACIET
amidophosphoribosyltransferase
anamox2_curated_scaffold_1808_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4776..5270)
DNA (495bp) protein (165aa)
colicin V production protein bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
colicin V production protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1808_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5281..6117)
DNA (837bp) protein (279aa)
Sporulation domain-containing protein Tax=Acidovorax sp. KKS102 RepID=K0IB09_9BURK
sporulation domain-containing protein
Sporulation domain-containing protein {ECO:0000313|EMBL:AFU46456.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
anamox2_curated_scaffold_1808_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6138..7460)
DNA (1323bp) protein (441aa)
FolC bifunctional protein; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1808_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7500..7886
DNA (387bp) protein (129aa)
protein yffB-like bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1808_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8006..8638
DNA (633bp) protein (211aa)
17 kDa surface antigen Tax=Acidovorax sp. NO-1 RepID=H0C2W6_9BURK
17 kDa surface antigen
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1808_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8777..9094
DNA (318bp) protein (106aa)
hypothetical protein Tax=Acidovorax radicis RepID=UPI0002376A60
hypothetical protein
UPF0345 protein C380_13795 {ECO:0000256|HAMAP-Rule:MF_01537}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
anamox2_curated_scaffold_1808_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9167..10510
DNA (1344bp) protein (448aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Argininosuccinate synthase Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTA9_ALIDB
anamox2_curated_scaffold_1808_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10527..11522
DNA (996bp) protein (332aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT90_ALIDB
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:GAO27375.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
anamox2_curated_scaffold_1808_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11600..12343
DNA (744bp) protein (248aa)
3-oxoacyl-ACP reductase Tax=Acidovorax sp. MR-S7 RepID=UPI0003739F68
Dehydrogenase {ECO:0000313|EMBL:GAD24695.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
3-oxoacyl-ACP reductase
anamox2_curated_scaffold_1808_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12348..13022)
DNA (675bp) protein (225aa)
membrane protein Tax=Acidovorax sp. MR-S7 RepID=UPI00035D2495
Uncharacterized protein {ECO:0000313|EMBL:GAD24697.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
anamox2_curated_scaffold_1808_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13200..14273)
DNA (1074bp) protein (358aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=Acidovorax delafieldii 2AN RepID=C5T9A0_ACIDE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1808_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14335..14820
DNA (486bp) protein (162aa)
nucleotide-binding protein; K09767 hypothetical protein bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1808_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14847..15509
DNA (663bp) protein (221aa)
hypothetical protein bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1808_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15512..16519
DNA (1008bp) protein (336aa)
metal dependent phosphohydrolase bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1808_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16586..16891)
DNA (306bp) protein (102aa)
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13)
muramoyltetrapeptide carboxypeptidase bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying 22 items

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